RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 LINC00696Q6ZRV3 163 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 OR8U1Q8NH10 309 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 GINS3Q9BRX5 216 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 SLC6A17Q9H1V8 727 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 TAF9BQ9HBM6 251 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 LHX6Q9UPM6 363 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 ETV7Q9Y603 341 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 ZC3H12DA2A288 527 aaKnown RBP10.91□□□□□ -0.66
SCN8A-208ENST00000599343 H0YIV9 168 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 ADAM12O43184 909 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 HPNP05981 417 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 CXCL12P48061 93 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 PKDCCQ504Y2 493 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 YOD1Q5VVQ6 348 aaPredicted RBP10.91□□□□□ -0.66
SCN8A-208ENST00000599343 DPY19L2P2Q6ZN68 376 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 MAVSQ7Z434 540 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 OR51S1Q8NGJ8 323 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 OR2G3Q8NGZ4 309 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 CLSTN3Q9BQT9 956 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 ARNT2Q9HBZ2 717 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 ANKRD10Q9NXR5 420 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 PPP1R2P9O14990 202 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 B3GALT4O96024 378 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.91□□□□□ -0.66
SCN8A-208ENST00000599343 PLAC9Q5JTB6 97 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 SSX9Q7RTT3 188 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 ATOH1Q92858 354 aaPredicted RBP10.91□□□□□ -0.66
SCN8A-208ENST00000599343 UTP23Q9BRU9 249 aaKnown RBP10.91□□□□□ -0.66
SCN8A-208ENST00000599343 A4GALTQ9NPC4 353 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 COL2A1P02458 1487 aaPredicted RBP10.91□□□□□ -0.66
SCN8A-208ENST00000599343 HS3ST1O14792 307 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 NME2P1O60361 137 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 SLC14A2Q15849 920 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 KCNRGQ8N5I3 272 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 BHLHE23Q8NDY6 225 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 FAM71CQ8NEG0 241 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 OR51A4Q8NGJ6 313 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 ARRDC3Q96B67 414 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 PBX4Q9BYU1 374 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 SSUH2Q9Y2M2 353 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 TMEM221A6NGB7 291 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 PMS2P2O95744 297 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 CPT2P23786 658 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 KIAA0141Q14154 515 aaPredicted RBP10.91□□□□□ -0.66
SCN8A-208ENST00000599343 ZNF468Q5VIY5 522 aaPredicted RBP10.91□□□□□ -0.66
SCN8A-208ENST00000599343 KDM4DQ6B0I6 523 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 SLCO4C1Q6ZQN7 724 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 CATSPERDQ86XM0 798 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 AMDHD1Q96NU7 426 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 RAB22AQ9UL26 194 aa10.91□□□□□ -0.66
SCN8A-208ENST00000599343 ATP1B1P05026 303 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 REEP5Q00765 189 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 FLI1Q01543 452 aaPredicted RBP10.9□□□□□ -0.66
SCN8A-208ENST00000599343 ZMAT1Q5H9K5 638 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 ZNF813Q6ZN06 617 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 NECAP1Q8NC96 275 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 EMG1Q92979 244 aaKnown RBP10.9□□□□□ -0.66
SCN8A-208ENST00000599343 LCORQ96JN0 433 aaPredicted RBP10.9□□□□□ -0.66
SCN8A-208ENST00000599343 CTRCQ99895 268 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 SYT11Q9BT88 431 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 RNF167Q9H6Y7 350 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 V9GYS6 101 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 SLC31A2O15432 143 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 OLFM2O95897 454 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 CALCBP10092 127 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 SLC35A2P78381 396 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 TRNP1Q6NT89 227 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 NAXDQ8IW45 347 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 EXO1Q9UQ84 846 aaKnown RBP10.9□□□□□ -0.66
SCN8A-208ENST00000599343 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.9□□□□□ -0.66
SCN8A-208ENST00000599343 TMEM235A6NFC5 223 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 ZNF732B4DXR9 585 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 F6UZH7 168 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 CER1O95813 267 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 HCCSP53701 268 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 RBPJQ06330 500 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 C9orf152Q5JTZ5 239 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 TOR2AQ5JU69 321 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 TIGD3Q6B0B8 471 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 FAM122BQ7Z309 247 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 ANGPTL5Q86XS5 388 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 OR51A2Q8NGJ7 313 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 OR51H1Q8NH63 302 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 SCARB1Q8WTV0 552 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 FAM103A1Q9BTL3 118 aaKnown RBP10.9□□□□□ -0.66
SCN8A-208ENST00000599343 MS4A8Q9BY19 250 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 CHST8Q9H2A9 424 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 ZNF814B7Z6K7 855 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 TPMTP51580 245 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 SEMA3BQ13214 749 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 MORN1Q5T089 497 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 KCTD11Q693B1 232 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 DBX2Q6ZNG2 339 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 Q6ZSR9 355 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 FAM185AQ8N0U4 392 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 TVP23CQ96ET8 276 aa10.9□□□□□ -0.66
SCN8A-208ENST00000599343 LRP5LA4QPB2 252 aa10.9□□□□□ -0.67
SCN8A-208ENST00000599343 FITM1A5D6W6 292 aa10.9□□□□□ -0.67
SCN8A-208ENST00000599343 SEC14L6B5MCN3 397 aa10.9□□□□□ -0.67
SCN8A-208ENST00000599343 ADAM10O14672 748 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms