RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SWI5Q1ZZU3 235 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 TTC33Q6PID6 262 aaPredicted RBP11.94□□□□□ -0.5
SCAF1-203ENST00000598359 CLEC2AQ6UVW9 174 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 IZUMO2Q6UXV1 221 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 DEF8Q6ZN54 512 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 ANKK1Q8NFD2 765 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 OR6N1Q8NGY5 312 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 SLCO4A1Q96BD0 722 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 LRGUKQ96M69 825 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 PRSS27Q9BQR3 290 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 RHNO1Q9BSD3 238 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 ULBP2Q9BZM5 246 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 MEPEQ9NQ76 525 aaPredicted RBP11.94□□□□□ -0.5
SCAF1-203ENST00000598359 CA10Q9NS85 328 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 TAS2R5Q9NYW4 299 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 AP4S1Q9Y587 144 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 MXRA5Q9NR99 2828 aa11.94□□□□□ -0.5
SCAF1-203ENST00000598359 A0A096LNT2 108 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 TCRBV5S2A0A599 114 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 H0YJX3 145 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 RNF13O43567 381 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 OR6A2O95222 327 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 MT-ATP6P00846 226 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 IGKV3-15P01624 115 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 OR4A8P0C604 315 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 UMPSP11172 480 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 CD79AP11912 226 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 B4GALT1P15291 398 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 CBR1P16152 277 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 SERPINF1P36955 418 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 LRRC23Q53EV4 343 aaPredicted RBP11.93□□□□□ -0.5
SCAF1-203ENST00000598359 C1QTNF12Q5T7M4 302 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 ZNF813Q6ZN06 617 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 SLC35D2Q76EJ3 337 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 SLC46A3Q7Z3Q1 461 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 PXKQ7Z7A4 578 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 NKAIN4Q8IVV8 208 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 PAPD5Q8NDF8 572 aaKnown RBP11.93□□□□□ -0.5
SCAF1-203ENST00000598359 OR10H5Q8NGA6 315 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 PFN4Q8NHR9 129 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 PROX1Q92786 737 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 MS4A3Q96HJ5 214 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 SORCS2Q96PQ0 1159 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 SH3GL1Q99961 368 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 KCTD14Q9BQ13 255 aaPredicted RBP11.93□□□□□ -0.5
SCAF1-203ENST00000598359 NANSQ9NR45 359 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 MAGEL2Q9UJ55 1249 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 POFUT2Q9Y2G5 429 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 PMF1-BGLAPU3KQ54 211 aa11.93□□□□□ -0.5
SCAF1-203ENST00000598359 IGHV2OR16-5A0A0B4J2B6 119 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 PATE4P0C8F1 98 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 HOXB1P14653 301 aaPredicted RBP11.92□□□□□ -0.5
SCAF1-203ENST00000598359 FUT4P22083 530 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 THBS4P35443 961 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 CSNK1A1P48729 337 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 EFNA4P52798 201 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 UGT2B15P54855 530 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 PIN1Q13526 163 aaPredicted RBP11.92□□□□□ -0.5
SCAF1-203ENST00000598359 MTX3Q5HYI7 312 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 LPCAT4Q643R3 524 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 KRT80Q6KB66 452 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 ADGRG5Q8IZF4 528 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 TMEM255BQ8WV15 326 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 LRR1Q96L50 414 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 PKP2Q99959 881 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 VRK1Q99986 396 aaPredicted RBP11.92□□□□□ -0.5
SCAF1-203ENST00000598359 ZNF426Q9BUY5 554 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 B3GAT2Q9NPZ5 323 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 B3GNT2Q9NY97 397 aa11.92□□□□□ -0.5
SCAF1-203ENST00000598359 SONP18583 2426 aaKnown RBP11.92□□□□□ -0.5
SCAF1-203ENST00000598359 DHRS12A0PJE2 317 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 FAM220BPB1ANY3 271 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 BLOC1S5-TXNDC5H3BN57 136 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 TP53P04637 393 aaPredicted RBP11.91□□□□□ -0.5
SCAF1-203ENST00000598359 HIST1H2ABP04908 130 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 ASAH2BP0C7U1 165 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 FUT1P19526 365 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 ARR3P36575 388 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 TAS2R41P59536 307 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 SNRPD2P62316 118 aaKnown RBP11.91□□□□□ -0.5
SCAF1-203ENST00000598359 CARTPTQ16568 116 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 C3orf36Q3SXR2 165 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 CYBRD1Q53TN4 286 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 CYP2R1Q6VVX0 501 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 HIST3H2AQ7L7L0 130 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 NANOGNBQ7Z5D8 188 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 ZCCHC24Q8N2G6 241 aaKnown RBP11.91□□□□□ -0.5
SCAF1-203ENST00000598359 FAM169BQ8N8A8 192 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 OR2T12Q8NG77 320 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 FGFBP3Q8TAT2 258 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 C10orf105Q8TEF2 133 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 CANT1Q8WVQ1 401 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 RASSF5Q8WWW0 418 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 FAM168AQ92567 244 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 HIST1H2ACQ93077 130 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 POP5Q969H6 163 aaKnown RBP11.91□□□□□ -0.5
SCAF1-203ENST00000598359 TMEM54Q969K7 222 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 TPD52L3Q96J77 140 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 MPP4Q96JB8 637 aa11.91□□□□□ -0.5
SCAF1-203ENST00000598359 YAE1D1Q9NRH1 226 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms