RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 RUNDC3AQ59EK9 446 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 SWT1Q5T5J6 900 aaKnown RBP10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 ZNF613Q6PF04 617 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 LRFN4Q6PJG9 635 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 GLCCI1Q86VQ1 547 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 RETREG3Q86VR2 466 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 SLC22A24Q8N4F4 322 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 ADAMTS16Q8TE57 1224 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 STON2Q8WXE9 905 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 RACGAP1Q9H0H5 632 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 MS4A5Q9H3V2 200 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 TMEM38BQ9NVV0 291 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 TREM2Q9NZC2 230 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 GLTPQ9NZD2 209 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 SLC7A8Q9UHI5 535 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 SLC7A7Q9UM01 511 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 TRIM33Q9UPN9 1127 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 CORO2BQ9UQ03 480 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 SPEF1Q9Y4P9 236 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 TENM1Q9UKZ4 2725 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 GMNCA6NCL1 334 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 B4DSR2 109 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 M0QX08 132 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 RNF13O43567 381 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 CDC14BO60729 498 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 OR6A2O95222 327 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 MT-ATP6P00846 226 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 PGA4P0DJD7 388 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 PGA3P0DJD8 388 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 GAAP10253 952 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 CD247P20963 164 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 RPS23P62266 143 aaKnown RBP10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 GNGT1P63211 74 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 GLO1Q04760 184 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 RUNX1T1Q06455 604 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 HNRNPA0Q13151 305 aaKnown RBP10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 AVPI1Q5T686 147 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 RGS7BPQ6MZT1 257 aaPredicted RBP10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 DEF8Q6ZN54 512 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 MEX3DQ86XN8 651 aaKnown RBP10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 C11orf65Q8NCR3 313 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 SLC30A7Q8NEW0 376 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 BHLHE22Q8NFJ8 381 aaPredicted RBP10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 SEMA6DQ8NFY4 1073 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 OR4K5Q8NGD3 323 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 OR6X1Q8NH79 312 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 RDH5Q92781 318 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 TMEM186Q96B77 213 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 TAMM41Q96BW9 452 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 ZNF347Q96SE7 839 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 OCEL1Q9H607 264 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 CCDC134Q9H6E4 229 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 NPHS2Q9NP85 383 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 HIF1ANQ9NWT6 349 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 TAAR3PQ9P1P4 343 aa10.35□□□□□ -0.75
SOX2-OT-228ENST00000597828 A0A0G2JND7 137 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 DHHO43323 396 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 PPIHO43447 177 aaKnown RBP10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 FMO6PO60774 539 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 SERPINA5P05154 406 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 MSMBP08118 114 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 QDPRP09417 244 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 OR8G3PP0DMU2 310 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 UMPSP11172 480 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 TNFRSF1BP20333 461 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 ATP4BP51164 291 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 ARFIP2P53365 341 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 CRYBA2P53672 197 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 GYS2P54840 703 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 RBBP4Q09028 425 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 NKPD1Q17RQ9 610 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 TMEM255AQ5JRV8 349 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 TTC33Q6PID6 262 aaPredicted RBP10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 C1orf229Q6ZS94 237 aaPredicted RBP10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 PIWIL3Q7Z3Z3 882 aaKnown RBP10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 SNX32Q86XE0 403 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 ICA1LQ8NDH6 482 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 ZNF566Q969W8 418 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 LRRC37BQ96QE4 947 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 CGREF1Q99674 301 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 PRSS27Q9BQR3 290 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 ZNF385DQ9H6B1 395 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 RNF121Q9H920 327 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 MEPEQ9NQ76 525 aaPredicted RBP10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 NANSQ9NR45 359 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 FGFR1OP2Q9NVK5 253 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 METRNQ9UJH8 293 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 LEF1Q9UJU2 399 aaPredicted RBP10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 CACNG2Q9Y698 323 aa10.34□□□□□ -0.75
SOX2-OT-228ENST00000597828 TRAPPC13A5PLN9 417 aa10.33□□□□□ -0.76
SOX2-OT-228ENST00000597828 C17orf100A8MU93 164 aa10.33□□□□□ -0.76
SOX2-OT-228ENST00000597828 SHOX2O60902 331 aaPredicted RBP10.33□□□□□ -0.76
SOX2-OT-228ENST00000597828 AVPP01185 164 aa10.33□□□□□ -0.76
SOX2-OT-228ENST00000597828 F13BP05160 661 aa10.33□□□□□ -0.76
SOX2-OT-228ENST00000597828 LCKP06239 509 aa10.33□□□□□ -0.76
SOX2-OT-228ENST00000597828 ASAH2BP0C7U1 165 aa10.33□□□□□ -0.76
SOX2-OT-228ENST00000597828 LSP1P33241 339 aa10.33□□□□□ -0.76
SOX2-OT-228ENST00000597828 UGT2B15P54855 530 aa10.33□□□□□ -0.76
SOX2-OT-228ENST00000597828 LMO4P61968 165 aa10.33□□□□□ -0.76
SOX2-OT-228ENST00000597828 CCL8P80075 99 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms