RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-204	ENST00000594661	CD3G	P09693	182 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	IFNGR1	P15260	489 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	EIF2S3	P41091	472 aa	Known RBP	14	□□□□□ -0.17
PNKP-204	ENST00000594661	GCGR	P47871	477 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	HSD17B7	P56937	341 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	RAB5B	P61020	215 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	E2F1	Q01094	437 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	HABP2	Q14520	560 aa	Predicted RBP	14	□□□□□ -0.17
PNKP-204	ENST00000594661	HLA-B	Q31612	363 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	C10orf91	Q5T1B1	145 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	WDR74	Q6RFH5	385 aa	Predicted RBP	14	□□□□□ -0.17
PNKP-204	ENST00000594661	LRRN1	Q6UXK5	716 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	MBOAT2	Q6ZWT7	520 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	RANBP3L	Q86VV4	465 aa	Predicted RBP	14	□□□□□ -0.17
PNKP-204	ENST00000594661	ZFP82	Q8N141	532 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	SAP25	Q8TEE9	199 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	PIGM	Q9H3S5	423 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	LANCL2	Q9NS86	450 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661		U3KQA8	63 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	TECTA	O75443	2155 aa		14	□□□□□ -0.17
PNKP-204	ENST00000594661	TMEM218	A2RU14	115 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	BRINP1	O60477	761 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	GKN3P	P0CG01	181 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	LIMS3	P0CW19	117 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	LIMS4	P0CW20	117 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	DRD5	P21918	477 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	STAT5A	P42229	794 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	ZNF136	P52737	540 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	ACSM1	Q08AH1	577 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	OR2B11	Q5JQS5	317 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	MRPL2	Q5T653	305 aa	Known RBP	13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	OR7E24	Q6IFN5	339 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	GUSBP11	Q6P575	273 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	B3GLCT	Q6Y288	498 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	ZFP41	Q8N8Y5	198 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	FAM98A	Q8NCA5	519 aa	Known RBP	13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	OR4N2	Q8NGD1	307 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	TMEM68	Q96MH6	324 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	VSTM2L	Q96N03	204 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	LMF2	Q9BU23	707 aa	Known RBP	13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	TMED9	Q9BVK6	235 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	SUSD2	Q9UGT4	822 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	PRR23D1	E9PI22	279 aa	Predicted RBP	13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	UBL3	O95164	117 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	AK1	P00568	194 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	GP1BA	P07359	652 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	PRG2	P13727	222 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	NID1	P14543	1247 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	MPG	P29372	298 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	PSMA6	P60900	246 aa	Known RBP	13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	SNTB2	Q13425	540 aa	Known RBP	13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	ACER2	Q5QJU3	275 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	NPSR1	Q6W5P4	371 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	MRGPRE	Q86SM8	312 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	C1orf210	Q8IVY1	113 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	OR4C6	Q8NH72	309 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	HAVCR2	Q8TDQ0	301 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	OSTF1	Q92882	214 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	PNPLA2	Q96AD5	504 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	GHRL	Q9UBU3	117 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	FBXL3	Q9UKT7	428 aa		13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	CARHSP1	Q9Y2V2	147 aa	Known RBP	13.99	□□□□□ -0.17
PNKP-204	ENST00000594661	WDFY4	Q6ZS81	3184 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	ADAMTS9	Q9P2N4	1935 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	C2orf92	A0A1B0GVN3	265 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	CPED1	A4D0V7	1026 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	PRODH	O43272	600 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	GSTZ1	O43708	216 aa	Predicted RBP	13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	CH25H	O95992	272 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	IGF2	P01344	180 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	IGKV1D-16	P01601	117 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	CFI	P05156	583 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	CNR1	P21554	472 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	RIDA	P52758	137 aa	Known RBP	13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	DGCR2	P98153	550 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	PITPNA	Q00169	270 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	PLAUR	Q03405	335 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	RBMS2	Q15434	407 aa	Known RBP	13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	FAM69A	Q5T7M9	428 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	IL20RB	Q6UXL0	311 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	OR6V1	Q8N148	313 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	RELL2	Q8NC24	303 aa	Predicted RBP	13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	OR2I1P	Q8NGU4	316 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	EDA	Q92838	391 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	DUSP23	Q9BVJ7	150 aa		13.98	□□□□□ -0.17
PNKP-204	ENST00000594661	TRAPPC13	A5PLN9	417 aa		13.97	□□□□□ -0.17
PNKP-204	ENST00000594661	CD8B2	A6NJW9	211 aa		13.97	□□□□□ -0.17
PNKP-204	ENST00000594661	PHYH	O14832	338 aa		13.97	□□□□□ -0.17
PNKP-204	ENST00000594661	GPR37	O15354	613 aa		13.97	□□□□□ -0.17
PNKP-204	ENST00000594661	AKR7A3	O95154	331 aa		13.97	□□□□□ -0.17
PNKP-204	ENST00000594661	UBB	P0CG47	229 aa		13.97	□□□□□ -0.17
PNKP-204	ENST00000594661	UBC	P0CG48	685 aa	Known RBP	13.97	□□□□□ -0.17
PNKP-204	ENST00000594661	CD8B	P10966	210 aa		13.97	□□□□□ -0.17
PNKP-204	ENST00000594661	MUC1	P15941	1255 aa	Predicted RBP	13.97	□□□□□ -0.17
PNKP-204	ENST00000594661	HTR2A	P28223	471 aa		13.97	□□□□□ -0.17
PNKP-204	ENST00000594661	RPS27A	P62979	156 aa	Known RBP	13.97	□□□□□ -0.17
PNKP-204	ENST00000594661	UBA52	P62987	128 aa	Known RBP	13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms