RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 ACTG1P63261 375 aa16.31■□□□□ 0.2
SPC24-206ENST00000592540 DMWDQ09019 674 aa16.31■□□□□ 0.2
SPC24-206ENST00000592540 ZNF141Q15928 474 aa16.31■□□□□ 0.2
SPC24-206ENST00000592540 FIGLAQ6QHK4 219 aa16.31■□□□□ 0.2
SPC24-206ENST00000592540 FAM122BQ7Z309 247 aa16.31■□□□□ 0.2
SPC24-206ENST00000592540 ANKRD9Q96BM1 317 aaPredicted RBP16.31■□□□□ 0.2
SPC24-206ENST00000592540 FAM3DQ96BQ1 224 aa16.31■□□□□ 0.2
SPC24-206ENST00000592540 LMF2Q9BU23 707 aaKnown RBP16.31■□□□□ 0.2
SPC24-206ENST00000592540 POTEKPQ9BYX7 375 aa16.31■□□□□ 0.2
SPC24-206ENST00000592540 FGF22Q9HCT0 170 aa16.31■□□□□ 0.2
SPC24-206ENST00000592540 COL4A2P08572 1712 aa16.31■□□□□ 0.2
SPC24-206ENST00000592540 TRBV23OR9-2A0A075B6M9 112 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 TNFSF14O43557 240 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 RAB3DO95716 219 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 HNRNPA1P09651 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
SPC24-206ENST00000592540 FBXO45P0C2W1 286 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 PPIAP62937 165 aaKnown RBP16.3■□□□□ 0.2
SPC24-206ENST00000592540 SRSF4Q08170 494 aaKnown RBP16.3■□□□□ 0.2
SPC24-206ENST00000592540 ARHGAP40Q5TG30 622 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 VITQ6UXI7 678 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 PM20D2Q8IYS1 436 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 BOLLQ8N9W6 283 aaKnown RBP16.3■□□□□ 0.2
SPC24-206ENST00000592540 OR1J2Q8NGS2 313 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 PHYHIPLQ96FC7 376 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 TOX2Q96NM4 488 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 SLC25A21Q9BQT8 299 aaPredicted RBP16.3■□□□□ 0.2
SPC24-206ENST00000592540 APOOQ9BUR5 198 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 ZNF471Q9BX82 626 aaPredicted RBP16.3■□□□□ 0.2
SPC24-206ENST00000592540 ATG5Q9H1Y0 275 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 SLC39A1Q9NY26 324 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 LOC100289279A0A1B0GTE1 492 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 EFCAB7A8K855 629 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 DISC1C4P0D8 188 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 H0YGG7 62 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 GUSBP08236 651 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 CD14P08571 375 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 ACRP10323 421 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 SLC25A4P12235 298 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 CSF2RAP15509 400 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 ARF3P61204 181 aaPredicted RBP16.3■□□□□ 0.2
SPC24-206ENST00000592540 NR0B2Q15466 257 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 ZNHIT3Q15649 155 aaPredicted RBP16.3■□□□□ 0.2
SPC24-206ENST00000592540 RAB11BQ15907 218 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 CCDC157Q569K6 752 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 BEX5Q5H9J7 111 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 C11orf87Q6NUJ2 197 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 UQCC3Q6UW78 93 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 TMEM229BQ8NBD8 167 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 C3orf49Q96BT1 292 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 SEH1LQ96EE3 360 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 TSNAXQ99598 290 aaKnown RBP16.3■□□□□ 0.2
SPC24-206ENST00000592540 FAM117AQ9C073 453 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 ACTR10Q9NZ32 417 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 ATPIF1Q9UII2 106 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 FBXO4Q9UKT5 387 aa16.3■□□□□ 0.2
SPC24-206ENST00000592540 IGKV1D-42A0A075B6H8 117 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 NPIPB9F8W1W9 429 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 M0QYG6 137 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 GPR31O00270 319 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 SMAD9O15198 467 aaKnown RBP16.29■□□□□ 0.2
SPC24-206ENST00000592540 RPL35P42766 123 aaKnown RBP16.29■□□□□ 0.2
SPC24-206ENST00000592540 CBX5P45973 191 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 UBE2IP63279 158 aaKnown RBP16.29■□□□□ 0.2
SPC24-206ENST00000592540 SNTB1Q13884 538 aaKnown RBP16.29■□□□□ 0.2
SPC24-206ENST00000592540 KIR2DS3Q14952 304 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 TAF13Q15543 124 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 HFEQ30201 348 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 PAN3Q58A45 887 aaKnown RBP16.29■□□□□ 0.2
SPC24-206ENST00000592540 TMEM205Q6UW68 189 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 CA13Q8N1Q1 262 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 TINAGL1Q9GZM7 467 aaPredicted RBP16.29■□□□□ 0.2
SPC24-206ENST00000592540 MYOZ1Q9NP98 299 aaPredicted RBP16.29■□□□□ 0.2
SPC24-206ENST00000592540 SLC17A5Q9NRA2 495 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 CPNE7Q9UBL6 633 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 MLXQ9UH92 298 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 RNF222A6NCQ9 220 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 SLC17A2O00624 439 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 OR10H2O60403 315 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 AKR7A3O95154 331 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 CSTAP01040 98 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 S1PR1P21453 382 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 RPS27P42677 84 aaKnown RBP16.29■□□□□ 0.2
SPC24-206ENST00000592540 GRK6P43250 576 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 KIR3DL2P43630 455 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 AKR1D1P51857 326 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 ADPRHP54922 357 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 CTXN1P60606 82 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 RPS21P63220 83 aaKnown RBP16.29■□□□□ 0.2
SPC24-206ENST00000592540 RASGEF1BQ0VAM2 473 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 DHRS2Q13268 280 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 C2orf27AQ580R0 203 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 ATPAF1Q5TC12 328 aaPredicted RBP16.29■□□□□ 0.2
SPC24-206ENST00000592540 ENPP7Q6UWV6 458 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 DPY19L4Q7Z388 723 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 PUSL1Q8N0Z8 303 aaKnown RBP16.29■□□□□ 0.2
SPC24-206ENST00000592540 GALNT16Q8N428 558 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 OR6N2Q8NGY6 317 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 TSEN15Q8WW01 171 aaKnown RBP16.29■□□□□ 0.2
SPC24-206ENST00000592540 COMMD9Q9P000 198 aa16.29■□□□□ 0.2
SPC24-206ENST00000592540 DPP7Q9UHL4 492 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms