RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 TMEM54Q969K7 222 aa18.85■□□□□ 0.61
R3HDM4-206ENST00000590454 SLC25A44Q96H78 314 aaPredicted RBP18.85■□□□□ 0.61
R3HDM4-206ENST00000590454 Q96M85 177 aa18.85■□□□□ 0.61
R3HDM4-206ENST00000590454 GPX7Q96SL4 187 aaPredicted RBP18.85■□□□□ 0.61
R3HDM4-206ENST00000590454 LINC00470Q9BZP3 86 aa18.85■□□□□ 0.61
R3HDM4-206ENST00000590454 VPS13CQ709C8 3753 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 NPIPB13A6NJU9 1138 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 NPIPB4C9JG80 1138 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 TRMUO75648 421 aaKnown RBP18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 KRT33AO76009 404 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 SOX14O95416 240 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 PPP1R3DO95685 299 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 PSMB1P20618 241 aaKnown RBP18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 ACVR1BP36896 505 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 DAP3P51398 398 aaKnown RBP18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 SORDQ00796 357 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 ROR2Q01974 943 aaKnown RBP18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 P2RY6Q15077 328 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 KLHL17Q6TDP4 642 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 RASSF6Q6ZTQ3 369 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 GPR137CQ8N3F9 429 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 SYT14Q8NB59 555 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 RASD2Q96D21 266 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 ADAD1Q96M93 576 aaKnown RBP18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 BDH2Q9BUT1 245 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 MRPL13Q9BYD1 178 aaKnown RBP18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 GPR35Q9HC97 309 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 NRIP3Q9NQ35 241 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 REV1Q9UBZ9 1251 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 IER3IP1Q9Y5U9 82 aa18.84■□□□□ 0.61
R3HDM4-206ENST00000590454 IMPA2O14732 288 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 ACADSP16219 412 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 CDH2P19022 906 aaPredicted RBP18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 PCSK6P29122 969 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 CSNK1A1P48729 337 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 PCYT1AP49585 367 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 DAPP51397 102 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 MYBPC1Q00872 1141 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 MESTQ5EB52 335 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 CLEC12AQ5QGZ9 265 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 LRFN4Q6PJG9 635 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 CXXC5Q7LFL8 322 aaKnown RBP18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 BHLHA15Q7RTS1 189 aaPredicted RBP18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 OR6N1Q8NGY5 312 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 KISS1RQ969F8 398 aaPredicted RBP18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 ZNF566Q969W8 418 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 S100PBPQ96BU1 408 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 NRBF2Q96F24 287 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 CENPNQ96H22 339 aaPredicted RBP18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 COX4I2Q96KJ9 171 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 LRR1Q96L50 414 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 WFIKKN1Q96NZ8 548 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 ACTR6Q9GZN1 396 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 SMURF2Q9HAU4 748 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 CRLF2Q9HC73 371 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 CDH10Q9Y6N8 788 aa18.83■□□□□ 0.6
R3HDM4-206ENST00000590454 TEX13CA0A0J9YWL9 993 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 SAC3D1A6NKF1 404 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 ZNF587BE7ETH6 402 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 G3V2T6 193 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 H7C1C5 153 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 RAD51DO75771 328 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 THBDP07204 575 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 ZNF23P17027 643 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 MPGP29372 298 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 LCN6P62502 163 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 DBPQ10586 325 aaPredicted RBP18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 CEACAM16Q2WEN9 425 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 FAHD1Q6P587 224 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 CD300LDQ6UXZ3 194 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 DPY19L2P2Q6ZN68 376 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 ARIH2OSQ8N7S6 290 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 ICA1LQ8NDH6 482 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 NOXO1Q8NFA2 376 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 IFT27Q9BW83 186 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 TAS2R16Q9NYV7 291 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 IL20Q9NYY1 176 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 GLTPQ9NZD2 209 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 OAZ3Q9UMX2 235 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 GPR52Q9Y2T5 361 aa18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 FN1P02751 2386 aaKnown RBP18.82■□□□□ 0.6
R3HDM4-206ENST00000590454 IGKV1D-43A0A0B4J1Z2 117 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 OR6C65A6NJZ3 312 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 RPL36A-HNRNPH2H7BZ11 118 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 SEC14L2O76054 403 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 IGHG1P01857 330 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 HRGP04196 525 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 IL32P24001 234 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 SLC6A6P31641 620 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 CLRN1P58418 232 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 FMODQ06828 376 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 TAF11Q15544 211 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 GABRA6Q16445 453 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 HIST3H3Q16695 136 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 ATG16L2Q8NAA4 619 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 NANOS1Q8WY41 292 aaKnown RBP18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 NMD3Q96D46 503 aaKnown RBP18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 ZC3HAV1LQ96H79 300 aaKnown RBP18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 ZNF570Q96NI8 536 aa18.81■□□□□ 0.6
R3HDM4-206ENST00000590454 ERMAPQ96PL5 475 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms