RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CD180Q99467 661 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 SFXN1Q9H9B4 322 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 SLC2A4RGQ9NR83 387 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 TSPAN11A1L157 253 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 PRR32B1ATL7 298 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 TBX6O95947 436 aaPredicted RBP13.84□□□□□ -0.19
CIRBP-228ENST00000590347 OR8U9P0C7N5 309 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 ATXN8OSP0DMR3 200 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 MAPK3P27361 379 aaPredicted RBP13.84□□□□□ -0.19
CIRBP-228ENST00000590347 DDTP30046 118 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 PDX1P52945 283 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 PSMD4P55036 377 aaKnown RBP13.84□□□□□ -0.19
CIRBP-228ENST00000590347 C10orf91Q5T1B1 145 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 PARGQ86W56 976 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 SLC35F3Q8IY50 421 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 ZNF615Q8N8J6 731 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 OR5M8Q8NGP6 311 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 OR8U1Q8NH10 309 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 RNF141Q8WVD5 230 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 MAFIPQ8WZ33 124 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 ZBTB8AQ96BR9 441 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 PIK3IP1Q96FE7 263 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 HHIPL1Q96JK4 782 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 SEC61A2Q9H9S3 476 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 CRLF2Q9HC73 371 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 CA14Q9ULX7 337 aa13.84□□□□□ -0.19
CIRBP-228ENST00000590347 PLXNB3Q9ULL4 1909 aa13.83□□□□□ -0.19
CIRBP-228ENST00000590347 SPAG17Q6Q759 2223 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 ZNF840PA6NDX5 716 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 H7C417 338 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 MOSPD3O75425 235 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 HEXAP06865 529 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 MPC1LP0DKB6 136 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 C9orf64Q5T6V5 341 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 ATPAF1Q5TC12 328 aaPredicted RBP13.83□□□□□ -0.2
CIRBP-228ENST00000590347 SPNS3Q6ZMD2 512 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 C15orf54Q8N8G6 183 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 ARL14EPQ8N8R7 260 aaPredicted RBP13.83□□□□□ -0.2
CIRBP-228ENST00000590347 OR56A3Q8NH54 315 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 WFIKKN2Q8TEU8 576 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 FGF13Q92913 245 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 RNF122Q9H9V4 155 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 MMP26Q9NRE1 261 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 MTFP1Q9UDX5 166 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 NLRC5Q86WI3 1866 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 ZNF106Q9H2Y7 1883 aaKnown RBP13.83□□□□□ -0.2
CIRBP-228ENST00000590347 SLC22A31A6NKX4 558 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 DBX1A6NMT0 343 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 H7BY64 318 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 BHLHE40O14503 412 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 RAB3DO95716 219 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 MT-ND4LP03901 98 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 AKAIN1P0CW23 69 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 OR8G3PP0DMU2 310 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 GSK3AP49840 483 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 RNF4P78317 190 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 TGM3Q08188 693 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 EBPQ15125 230 aaKnown RBP13.83□□□□□ -0.2
CIRBP-228ENST00000590347 PAPD4Q6PIY7 484 aaKnown RBP13.83□□□□□ -0.2
CIRBP-228ENST00000590347 TMEM220Q6QAJ8 160 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 DBX2Q6ZNG2 339 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 MAMDC2Q7Z304 686 aaPredicted RBP13.83□□□□□ -0.2
CIRBP-228ENST00000590347 HSD11B1LQ7Z5J1 315 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 RASGEF1AQ8N9B8 481 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 OR9A1PQ8NGU1 263 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 OR2G2Q8NGZ5 317 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 SETD7Q8WTS6 366 aaKnown RBP13.83□□□□□ -0.2
CIRBP-228ENST00000590347 SUSD6Q92537 303 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 PRAP1Q96NZ9 151 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 SMIM3Q9BZL3 60 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 GTF2A1LQ9UNN4 478 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 ADAM18Q9Y3Q7 739 aa13.83□□□□□ -0.2
CIRBP-228ENST00000590347 FITM1A5D6W6 292 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 RIIAD1A6NNX1 92 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 FGBP02675 491 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 ILF3Q12906 894 aaKnown RBP eCLIP13.82□□□□□ -0.2
CIRBP-228ENST00000590347 OR8G1Q15617 311 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 ALG11Q2TAA5 492 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 SLC22A6Q4U2R8 563 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 PLEKHS1Q5SXH7 462 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 OR4C11Q6IEV9 310 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 STAC2Q6ZMT1 411 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 C1QTNF2Q9BXJ5 285 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 SPACA1Q9HBV2 294 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 CDV3Q9UKY7 258 aaKnown RBP13.82□□□□□ -0.2
CIRBP-228ENST00000590347 MRPS23Q9Y3D9 190 aaKnown RBP13.82□□□□□ -0.2
CIRBP-228ENST00000590347 ZNF726A6NNF4 738 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 SOX1O00570 391 aaPredicted RBP13.82□□□□□ -0.2
CIRBP-228ENST00000590347 ADH1CP00326 375 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 CD74P04233 296 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 CCL5P13501 91 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 TPT1P13693 172 aaKnown RBP13.82□□□□□ -0.2
CIRBP-228ENST00000590347 MC3RP41968 323 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 LSM6P62312 80 aaKnown RBP13.82□□□□□ -0.2
CIRBP-228ENST00000590347 SMAD3P84022 425 aaKnown RBP13.82□□□□□ -0.2
CIRBP-228ENST00000590347 PPP1R1AQ13522 171 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 C4orf17Q53FE4 359 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 DND1Q8IYX4 353 aaKnown RBP13.82□□□□□ -0.2
CIRBP-228ENST00000590347 LINC00471Q8N535 108 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 NAXEQ8NCW5 288 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms