RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ESPL1Q14674 2120 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 OR6C68A6NDL8 312 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 EEF1E1-BLOC1S5C9J1V9 151 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 H0YAE9 185 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 MSTNO14793 375 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 EEF1E1O43324 174 aaKnown RBP13.4□□□□□ -0.26
ATG4D-211ENST00000589753 CNOT4O95628 575 aaKnown RBP13.4□□□□□ -0.26
ATG4D-211ENST00000589753 QDPRP09417 244 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 CAPGP40121 348 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 HSPA13P48723 471 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 PCYT1AP49585 367 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 ADARB1P78563 741 aaKnown RBP13.4□□□□□ -0.26
ATG4D-211ENST00000589753 CRMP1Q14194 572 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 THEM4Q5T1C6 240 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 Q6ZT83 130 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 BEND4Q6ZU67 534 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 ABHD12BQ7Z5M8 362 aaPredicted RBP13.4□□□□□ -0.26
ATG4D-211ENST00000589753 MRGPRGQ86SM5 289 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 LUZP2Q86TE4 346 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 CYB561A3Q8NBI2 242 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 FAM81AQ8TBF8 368 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 MCHR2Q969V1 340 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 ULBP2Q9BZM5 246 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 SYT4Q9H2B2 425 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 ASB6Q9NWX5 421 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 MALT1Q9UDY8 824 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 GPR52Q9Y2T5 361 aa13.4□□□□□ -0.26
ATG4D-211ENST00000589753 SMG1Q96Q15 3661 aaKnown RBP13.39□□□□□ -0.27
ATG4D-211ENST00000589753 ZNF587BE7ETH6 402 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 J3QKU1 62 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 M0R129 80 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 PRKYO43930 277 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 ZG16O60844 167 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 PAICSP22234 425 aaKnown RBP13.39□□□□□ -0.27
ATG4D-211ENST00000589753 ROR2Q01974 943 aaKnown RBP13.39□□□□□ -0.27
ATG4D-211ENST00000589753 FMODQ06828 376 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 FAPQ12884 760 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 SLC25A35Q3KQZ1 300 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 LRFN4Q6PJG9 635 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 LINGO2Q7L985 606 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 DEPDC4Q8N2C3 294 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 TCEANCQ8N8B7 351 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 LILRB4Q8NHJ6 448 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 CA5BP1Q8WTZ4 195 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 NMD3Q96D46 503 aaKnown RBP13.39□□□□□ -0.27
ATG4D-211ENST00000589753 DDOQ99489 341 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 APOL4Q9BPW4 351 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 NUAK2Q9H093 628 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 FN3KQ9H479 309 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 CRLF2Q9HC73 371 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 GPR35Q9HC97 309 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 RPRD1BQ9NQG5 326 aaKnown RBP13.39□□□□□ -0.27
ATG4D-211ENST00000589753 IMPAD1Q9NX62 359 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 JKAMPQ9P055 326 aa13.39□□□□□ -0.27
ATG4D-211ENST00000589753 FAM183AA6NL82 134 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 A8MXE2 369 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 PRR23D1E9PI22 279 aaPredicted RBP13.38□□□□□ -0.27
ATG4D-211ENST00000589753 RPL36A-HNRNPH2H7BZ11 118 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 TLX2O43763 284 aaPredicted RBP13.38□□□□□ -0.27
ATG4D-211ENST00000589753 SLC16A7O60669 478 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 PRR23D2P0DMB1 279 aaPredicted RBP13.38□□□□□ -0.27
ATG4D-211ENST00000589753 AGAP20933 346 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 CRABP1P29762 137 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 ZNF133P52736 654 aaPredicted RBP13.38□□□□□ -0.27
ATG4D-211ENST00000589753 SLC25A1P53007 311 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 EFNB1P98172 346 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 IL18R1Q13478 541 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 CEACAM16Q2WEN9 425 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 C10orf128Q5T292 105 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 C6orf52Q5T4I8 152 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 PLBD1Q6P4A8 553 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 DNM1P34Q6PK57 102 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 XKRXQ6PP77 449 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 ZNF474Q6S9Z5 364 aaPredicted RBP13.38□□□□□ -0.27
ATG4D-211ENST00000589753 CXXC5Q7LFL8 322 aaKnown RBP13.38□□□□□ -0.27
ATG4D-211ENST00000589753 CPOQ8IVL8 374 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 GABRG1Q8N1C3 465 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 ZNF808Q8N4W9 903 aaPredicted RBP13.38□□□□□ -0.27
ATG4D-211ENST00000589753 OR8J1Q8NGP2 316 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 TMEM163Q8TC26 289 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 TRUB1Q8WWH5 349 aaKnown RBP13.38□□□□□ -0.27
ATG4D-211ENST00000589753 ITLN2Q8WWU7 325 aaPredicted RBP13.38□□□□□ -0.27
ATG4D-211ENST00000589753 NSMAFQ92636 917 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 TFAP2CQ92754 450 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 OTULINQ96BN8 352 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 IL4I1Q96RQ9 567 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 ZNF184Q99676 751 aaPredicted RBP13.38□□□□□ -0.27
ATG4D-211ENST00000589753 RBM24Q9BX46 236 aaKnown RBP13.38□□□□□ -0.27
ATG4D-211ENST00000589753 RERGLQ9H628 205 aa13.38□□□□□ -0.27
ATG4D-211ENST00000589753 SRA1Q9HD15 236 aaKnown RBP13.38□□□□□ -0.27
ATG4D-211ENST00000589753 HINT3Q9NQE9 182 aaKnown RBP13.38□□□□□ -0.27
ATG4D-211ENST00000589753 IGKV1D-43A0A0B4J1Z2 117 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 FAM90A27PA6NNH2 459 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 DHHO43323 396 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 KHDRBS3O75525 346 aaKnown RBP13.37□□□□□ -0.27
ATG4D-211ENST00000589753 CLIC3O95833 236 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 CTLA4P16410 223 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 MPGP29372 298 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 ASCL1P50553 236 aa13.37□□□□□ -0.27
ATG4D-211ENST00000589753 ZNF84P51523 738 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms