RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 NRG4Q8WWG1 115 aa10.74□□□□□ -0.69
DNMT1-218ENST00000589294 HDAC2Q92769 488 aaKnown RBP10.74□□□□□ -0.69
DNMT1-218ENST00000589294 RASD2Q96D21 266 aa10.74□□□□□ -0.69
DNMT1-218ENST00000589294 HRASLS5Q96KN8 279 aa10.74□□□□□ -0.69
DNMT1-218ENST00000589294 SLC38A2Q96QD8 506 aa10.74□□□□□ -0.69
DNMT1-218ENST00000589294 DDOQ99489 341 aa10.74□□□□□ -0.69
DNMT1-218ENST00000589294 USB1Q9BQ65 265 aaKnown RBP10.74□□□□□ -0.69
DNMT1-218ENST00000589294 TOR3AQ9H497 397 aa10.74□□□□□ -0.69
DNMT1-218ENST00000589294 RIBC2Q9H4K1 309 aa10.74□□□□□ -0.69
DNMT1-218ENST00000589294 GPR35Q9HC97 309 aa10.74□□□□□ -0.69
DNMT1-218ENST00000589294 CMC2Q9NRP2 79 aa10.74□□□□□ -0.69
DNMT1-218ENST00000589294 PRSS50Q9UI38 385 aa10.74□□□□□ -0.69
DNMT1-218ENST00000589294 NCOA6Q14686 2063 aaPredicted RBP10.73□□□□□ -0.69
DNMT1-218ENST00000589294 RIIAD1A6NNX1 92 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 EEF1E1-BLOC1S5C9J1V9 151 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 ZNF587BE7ETH6 402 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 M0R3G1 203 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 DLGAP1O14490 977 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 SURF4O15260 269 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 EEF1E1O43324 174 aaKnown RBP10.73□□□□□ -0.69
DNMT1-218ENST00000589294 RENP00797 406 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 IGHV3-9P01782 118 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 QDPRP09417 244 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 EPHA2P29317 976 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 MPGP29372 298 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 EFNB1P98172 346 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 TGFBR3Q03167 851 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.73□□□□□ -0.69
DNMT1-218ENST00000589294 FAPQ12884 760 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 MESTQ5EB52 335 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 TMEM236Q5W0B7 351 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 FBXW10Q5XX13 1052 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 C12orf73Q69YU5 71 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 PTCHD4Q6ZW05 846 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 LUZP2Q86TE4 346 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 IQCF1Q8N6M8 205 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 ZNF555Q8NEP9 628 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 NOXO1Q8NFA2 376 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 TRUB1Q8WWH5 349 aaKnown RBP10.73□□□□□ -0.69
DNMT1-218ENST00000589294 MCHR2Q969V1 340 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 NMD3Q96D46 503 aaKnown RBP10.73□□□□□ -0.69
DNMT1-218ENST00000589294 BOD1Q96IK1 185 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 MBOAT4Q96T53 435 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 NMNAT3Q96T66 252 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 ULBP2Q9BZM5 246 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 CRLF2Q9HC73 371 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 FAM118AQ9NWS6 357 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 NDRG4Q9ULP0 352 aaKnown RBP10.73□□□□□ -0.69
DNMT1-218ENST00000589294 DOPEY1Q5JWR5 2465 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 LRRK2Q5S007 2527 aa10.73□□□□□ -0.69
DNMT1-218ENST00000589294 LOC100130705A0A1B0GUX0 176 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 OR6C68A6NDL8 312 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 DHHO43323 396 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 ZNF3P17036 446 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 PAICSP22234 425 aaKnown RBP10.72□□□□□ -0.69
DNMT1-218ENST00000589294 CRABP1P29762 137 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 CD79BP40259 229 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 SLC25A1P53007 311 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 SH3BGRP55822 239 aaPredicted RBP10.72□□□□□ -0.69
DNMT1-218ENST00000589294 CDC42P60953 191 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 ROR2Q01974 943 aaKnown RBP10.72□□□□□ -0.69
DNMT1-218ENST00000589294 SRSF1Q07955 248 aaKnown RBP eCLIP10.72□□□□□ -0.69
DNMT1-218ENST00000589294 LGALS3BPQ08380 585 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 CD47Q08722 323 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 SNAPC1Q16533 368 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 PHYHD1Q5SRE7 291 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 C10orf128Q5T292 105 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 SFRP5Q5T4F7 317 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 C1QTNF12Q5T7M4 302 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 TTC23Q5W5X9 447 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 OR7E24Q6IFN5 339 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 LEG1Q6P5S2 330 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 DNM1P34Q6PK57 102 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 SLC25A47Q6Q0C1 308 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.72□□□□□ -0.69
DNMT1-218ENST00000589294 DHRSXQ8N5I4 330 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 SLC37A3Q8NCC5 494 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 SSC4DQ8WTU2 575 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 RNASE6Q93091 150 aaKnown RBP10.72□□□□□ -0.69
DNMT1-218ENST00000589294 PLEKHA8Q96JA3 519 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 RBM24Q9BX46 236 aaKnown RBP10.72□□□□□ -0.69
DNMT1-218ENST00000589294 TAS2R16Q9NYV7 291 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 TVP23BQ9NYZ1 205 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 GPR52Q9Y2T5 361 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 TENM4Q6N022 2769 aa10.72□□□□□ -0.69
DNMT1-218ENST00000589294 H0YAE9 185 aa10.71□□□□□ -0.69
DNMT1-218ENST00000589294 C16orf97H3BN30 126 aa10.71□□□□□ -0.69
DNMT1-218ENST00000589294 SLC16A7O60669 478 aa10.71□□□□□ -0.69
DNMT1-218ENST00000589294 SLC2A10O95528 541 aa10.71□□□□□ -0.69
DNMT1-218ENST00000589294 HOXB1P14653 301 aaPredicted RBP10.71□□□□□ -0.69
DNMT1-218ENST00000589294 PSMB1P20618 241 aaKnown RBP10.71□□□□□ -0.69
DNMT1-218ENST00000589294 COX5AP20674 150 aa10.71□□□□□ -0.69
DNMT1-218ENST00000589294 IGHV1-2P23083 117 aa10.71□□□□□ -0.69
DNMT1-218ENST00000589294 GGT2P36268 569 aa10.71□□□□□ -0.69
DNMT1-218ENST00000589294 VHLP40337 213 aa10.71□□□□□ -0.69
DNMT1-218ENST00000589294 GUCA1AP43080 201 aaPredicted RBP10.71□□□□□ -0.69
DNMT1-218ENST00000589294 CENPAP49450 140 aa10.71□□□□□ -0.69
DNMT1-218ENST00000589294 ZNF84P51523 738 aa10.71□□□□□ -0.69
DNMT1-218ENST00000589294 SPTBN1Q01082 2364 aaKnown RBP10.71□□□□□ -0.69
DNMT1-218ENST00000589294 KEAP1Q14145 624 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms