RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CRLF2Q9HC73 371 aa17.24■□□□□ 0.35
CIRBP-220ENST00000588917 ORC6Q9Y5N6 252 aa17.24■□□□□ 0.35
CIRBP-220ENST00000588917 DIDO1Q9BTC0 2240 aaKnown RBP17.24■□□□□ 0.35
CIRBP-220ENST00000588917 PPP1R3DO95685 299 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 QDPRP09417 244 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 HOXB1P14653 301 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-220ENST00000588917 CDH2P19022 906 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-220ENST00000588917 PAX7P23759 505 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 POU1F1P28069 291 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 GUCA1AP43080 201 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-220ENST00000588917 GIPRP48546 466 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 RCN1Q15293 331 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 SLC36A3Q495N2 470 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 CLEC12AQ5QGZ9 265 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 SP5Q6BEB4 398 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-220ENST00000588917 SLC27A4Q6P1M0 643 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 LNX2Q8N448 690 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 SYT14Q8NB59 555 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 NOXO1Q8NFA2 376 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 HSD17B8Q92506 261 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 HDAC2Q92769 488 aaKnown RBP17.23■□□□□ 0.35
CIRBP-220ENST00000588917 EME1Q96AY2 570 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 MUS81Q96NY9 551 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 SNX18Q96RF0 628 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 CIB1Q99828 191 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 NPDC1Q9NQX5 325 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-220ENST00000588917 C8orf4Q9NR00 106 aa17.23■□□□□ 0.35
CIRBP-220ENST00000588917 TEX13CA0A0J9YWL9 993 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 PRSS37A4D1T9 235 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 TUBAL3A6NHL2 446 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 BHLHE40O14503 412 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 DHHO43323 396 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 LYZL6O75951 148 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 SOX14O95416 240 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 TP53P04637 393 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-220ENST00000588917 HMGN1P05114 100 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 IGFBP5P24593 272 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 ZNF84P51523 738 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 ZNF133P52736 654 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-220ENST00000588917 CRISP1P54107 249 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 PPP2R2BQ00005 443 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 MYBPC1Q00872 1141 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 RUNX1T1Q06455 604 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 CD47Q08722 323 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 KRR1Q13601 381 aaKnown RBP17.22■□□□□ 0.35
CIRBP-220ENST00000588917 DAG1Q14118 895 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 CEACAM16Q2WEN9 425 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 ANKRD16Q6P6B7 361 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 LRFN4Q6PJG9 635 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 ZBTB49Q6ZSB9 765 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 JAZF1Q86VZ6 243 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 CCDC36Q8IYA8 594 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 C17orf78Q8N4C9 275 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 MCHR2Q969V1 340 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 ALKBH3Q96Q83 286 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-220ENST00000588917 PLA2G12AQ9BZM1 189 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 USE1Q9NZ43 259 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 KLHL21Q9UJP4 597 aa17.22■□□□□ 0.35
CIRBP-220ENST00000588917 INTS1Q8N201 2190 aaKnown RBP17.22■□□□□ 0.35
CIRBP-220ENST00000588917 ZNF99A8MXY4 864 aaPredicted RBP17.21■□□□□ 0.35
CIRBP-220ENST00000588917 SOCS2O14508 198 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 RENP00797 406 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 IFNGP01579 166 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 ITGA5P08648 1049 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 HOXC12P31275 282 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 KIR2DL3P43628 341 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 ALDH3A2P51648 485 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 RAD23AP54725 363 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 LGALS3BPQ08380 585 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 GINS1Q14691 196 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 GABRA6Q16445 453 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 TIMM23BQ5SRD1 257 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 PHYHD1Q5SRE7 291 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 DMRTC2Q8IXT2 367 aaPredicted RBP17.21■□□□□ 0.35
CIRBP-220ENST00000588917 OR8D4Q8NGM9 314 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 MARVELD3Q96A59 401 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 MUCL1Q96DR8 90 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 DACH2Q96NX9 599 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 ACTR6Q9GZN1 396 aa17.21■□□□□ 0.35
CIRBP-220ENST00000588917 VSX1Q9NZR4 365 aaPredicted RBP17.21■□□□□ 0.35
CIRBP-220ENST00000588917 SLC22A23A1A5C7 686 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 CASKO14936 926 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 IGFBP2P18065 325 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 GRNP28799 593 aaKnown RBP17.2■□□□□ 0.34
CIRBP-220ENST00000588917 CRABP1P29762 137 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 GRK5P34947 590 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 CDK5Q00535 292 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 NRN1LQ496H8 165 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 MESTQ5EB52 335 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 C10orf128Q5T292 105 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 DNM1P34Q6PK57 102 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 MEX3BQ6ZN04 569 aaKnown RBP17.2■□□□□ 0.34
CIRBP-220ENST00000588917 ZNF627Q7L945 461 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 LINGO2Q7L985 606 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 WDFY1Q8IWB7 410 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 CBR4Q8N4T8 237 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 RASD2Q96D21 266 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 MED18Q9BUE0 208 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 PRRG3Q9BZD7 231 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 MOV10Q9HCE1 1003 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms