RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 ELF5Q9UKW6 265 aaPredicted RBP12.74□□□□□ -0.37
NEDD4L-223ENST00000588516 CLEC4AQ9UMR7 237 aa12.74□□□□□ -0.37
NEDD4L-223ENST00000588516 FOXJ3Q9UPW0 622 aa12.74□□□□□ -0.37
NEDD4L-223ENST00000588516 DTX4Q9Y2E6 619 aa12.74□□□□□ -0.37
NEDD4L-223ENST00000588516 DSPP15924 2871 aaKnown RBP12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 TRBV5-7A0A0A0MS05 114 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 CCDC163A0A0D9SF12 145 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 TMEM72A0PK05 275 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 UBE2QL1A1L167 161 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 MEGF11A6BM72 1044 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 LINC00862A6NCI5 91 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 HRKO00198 91 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 ZNF593O00488 134 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 PIN1P1O15428 100 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 XRCC3O43542 346 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 OR2T1O43869 369 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 CREBL2O60519 120 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 UPK3AO75631 287 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 MT-ND4P03905 459 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 IFNGR1P15260 489 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 CD38P28907 300 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 TACR3P29371 465 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 OR3A3P47888 321 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 MECP2P51608 486 aaKnown RBP12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 PNLIPRP2P54317 469 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 RAP2BP61225 183 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 MAT1AQ00266 395 aaKnown RBP12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 RPL18Q07020 188 aaKnown RBP12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 CBFBQ13951 182 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 ZNF542PQ5EBM4 170 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 TEX261Q6UWH6 196 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 UTS2BQ765I0 119 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 SLC29A4Q7RTT9 530 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 ZNF761Q86XN6 746 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 MEIOBQ8N635 442 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 OR11H7Q8NGC8 314 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 STK35Q8TDR2 534 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 SMAP2Q8WU79 429 aaPredicted RBP12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 LPAR4Q99677 370 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 CD93Q9NPY3 652 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 PNO1Q9NRX1 252 aaKnown RBP12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 CUTCQ9NTM9 273 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 UPB1Q9UBR1 384 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 CKLFQ9UBR5 152 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 RCE1Q9Y256 329 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 CLDN16Q9Y5I7 305 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 U3KQ87 197 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 NUP210LQ5VU65 1888 aa12.73□□□□□ -0.37
NEDD4L-223ENST00000588516 A0A1B0GVC2 190 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 A0A1B0GVT2 93 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 LNP1A1A4G5 178 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 A6NIN4 97 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 A6NIZ1 184 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 ACOD1A6NK06 481 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 RHPN2P1A8MT19 583 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 SULT1C2O00338 296 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 AKR7A2O43488 359 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 NDUFB5O43674 189 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 CDC123O75794 336 aaPredicted RBP12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 SLC22A5O76082 557 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 CLPSP04118 112 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 WNT1P04628 370 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 CD2P06729 351 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 CELA2BP08218 269 aaPredicted RBP12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 SYPP08247 313 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 GIPP09681 153 aaPredicted RBP12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 ALOX5APP20292 161 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 CRABP1P29762 137 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 POLR2HP52434 150 aaKnown RBP12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 MAZP56270 477 aaKnown RBP12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 RAP1BP61224 184 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 HNRNPKP61978 463 aaKnown RBP eCLIP12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 RAP1AP62834 184 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 SGCBQ16585 318 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 C1QTNF12Q5T7M4 302 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 SLC18B1Q6NT16 456 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 OGFOD3Q6PK18 319 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 DNM1P34Q6PK57 102 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 DNM1P46Q6ZS02 220 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 C17orf82Q86X59 251 aaPredicted RBP12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 KMT5CQ86Y97 462 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 GLB1L2Q8IW92 636 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 RFLNBQ8N5W9 214 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 ZNF248Q8NDW4 579 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 TSTD1Q8NFU3 115 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 OR4D9Q8NGE8 314 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 OR2G2Q8NGZ5 317 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 OR52I2Q8NH67 350 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 LMX1AQ8TE12 382 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 PTPMT1Q8WUK0 201 aaPredicted RBP12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 METTL21AQ8WXB1 218 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 TMEM234Q8WY98 164 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 HSD17B8Q92506 261 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 MAP6Q96JE9 813 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 SORCS2Q96PQ0 1159 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 YIPF2Q9BWQ6 316 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 TBL1XR1Q9BZK7 514 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 SEMA4CQ9C0C4 833 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 NOX3Q9HBY0 568 aa12.72□□□□□ -0.37
NEDD4L-223ENST00000588516 SRA1Q9HD15 236 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms