RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 CDK20Q8IZL9 346 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 FITM2Q8N6M3 262 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 MAPK1IP1LQ8NDC0 245 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 OR10H5Q8NGA6 315 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 LIPHQ8WWY8 451 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 HTRA1Q92743 480 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 RNF121Q9H920 327 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 SEC61A2Q9H9S3 476 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 CMAHPQ9Y471 501 aa10.74□□□□□ -0.69
SS18-225ENST00000585121 IGHV4-30-2A0A087WSY4 118 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 ZNF503-AS2A6NEH8 195 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 hCG_2039718K7EN88 272 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 NME4O00746 187 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 SERPINA1P01009 418 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 PGA4P0DJD7 388 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 PGA3P0DJD8 388 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 IFI30P13284 250 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 THBS4P35443 961 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 YAP1P46937 504 aaKnown RBP10.73□□□□□ -0.69
SS18-225ENST00000585121 GIPRP48546 466 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 PDLIM4P50479 330 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 PSME3P61289 254 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 HGFACQ04756 655 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 SNTB2Q13425 540 aaKnown RBP10.73□□□□□ -0.69
SS18-225ENST00000585121 TAF11Q15544 211 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 KRT80Q6KB66 452 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 TMEM53Q6P2H8 277 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 LRFN4Q6PJG9 635 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 CBLL1Q75N03 491 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 RRM2BQ7LG56 351 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 WDFY1Q8IWB7 410 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 SLC22A24Q8N4F4 322 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 ZNF525Q8N782 197 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 NOXO1Q8NFA2 376 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 ASB10Q8WXI3 467 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 BPIFA2Q96DR5 249 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 RAB1BQ9H0U4 201 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 MYLK2Q9H1R3 596 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 KCNN2Q9H2S1 579 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 NOX3Q9HBY0 568 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 C20orf141Q9NUB4 165 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 RPS6KA6Q9UK32 745 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 A4GNTQ9UNA3 340 aa10.73□□□□□ -0.69
SS18-225ENST00000585121 INAFM1C9JVW0 142 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 MGRN1O60291 552 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 PTHP01270 115 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 SAGP10523 405 aaPredicted RBP10.72□□□□□ -0.69
SS18-225ENST00000585121 ACADSP16219 412 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 NR4A1P22736 598 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 PPOXP50336 477 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 RPS23P62266 143 aaKnown RBP10.72□□□□□ -0.69
SS18-225ENST00000585121 LAPTM4AQ15012 233 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 ANKDD1AQ495B1 522 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 ALG10Q5BKT4 473 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 C8orf82Q6P1X6 216 aaPredicted RBP10.72□□□□□ -0.69
SS18-225ENST00000585121 MYPOPQ86VE0 399 aaPredicted RBP10.72□□□□□ -0.69
SS18-225ENST00000585121 SKA3Q8IX90 412 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 RNF113BQ8IZP6 322 aaKnown RBP10.72□□□□□ -0.69
SS18-225ENST00000585121 OFCC1Q8IZS5 231 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 SYT14Q8NB59 555 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 MCHR2Q969V1 340 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 MS4A3Q96HJ5 214 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 HSH2DQ96JZ2 352 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 ZNF347Q96SE7 839 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 NDEL1Q9GZM8 345 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 PLK3Q9H4B4 646 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 DYNLRB1Q9NP97 96 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 MYOZ1Q9NP98 299 aaPredicted RBP10.72□□□□□ -0.69
SS18-225ENST00000585121 SPAG4Q9NPE6 437 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 TMEM38BQ9NVV0 291 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 ADA2Q9NZK5 511 aa10.72□□□□□ -0.69
SS18-225ENST00000585121 GMPR2Q9P2T1 348 aaKnown RBP10.72□□□□□ -0.69
SS18-225ENST00000585121 FAM32AQ9Y421 112 aaKnown RBP10.72□□□□□ -0.69
SS18-225ENST00000585121 NPIPB13A6NJU9 1138 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 NPIPB4C9JG80 1138 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 TLX2O43763 284 aaPredicted RBP10.71□□□□□ -0.69
SS18-225ENST00000585121 PIP5K1CO60331 668 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 TRMUO75648 421 aaKnown RBP10.71□□□□□ -0.69
SS18-225ENST00000585121 ATP5HO75947 161 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 ZNF14P17017 642 aaPredicted RBP10.71□□□□□ -0.69
SS18-225ENST00000585121 GUCA1AP43080 201 aaPredicted RBP10.71□□□□□ -0.69
SS18-225ENST00000585121 MYBPC1Q00872 1141 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 PLP2Q04941 152 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 RAB39AQ14964 217 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 CARTPTQ16568 116 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 SLC36A2Q495M3 483 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 NRN1LQ496H8 165 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 ZNF730Q6ZMV8 503 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 SLC16A14Q7RTX9 510 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 OAFQ86UD1 273 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 NRMQ8IXM6 262 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 MOSPD2Q8NHP6 518 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 C10orf105Q8TEF2 133 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 ACOT11Q8WXI4 607 aaPredicted RBP10.71□□□□□ -0.69
SS18-225ENST00000585121 SORCS2Q96PQ0 1159 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 RBP7Q96R05 134 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 SH3GL3Q99963 347 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 PIMREGQ9BSJ6 248 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 LRMDAQ9H2I8 198 aa10.71□□□□□ -0.69
SS18-225ENST00000585121 TXNIPQ9H3M7 391 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms