RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CDCA4Q9BXL8 241 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 ENAMQ9NRM1 1142 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 MED17Q9NVC6 651 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 ASH2LQ9UBL3 628 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 CHRNA9Q9UGM1 479 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 CMAHPQ9Y471 501 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 CSAG2Q9Y5P2 127 aa9.27□□□□□ -0.93
RFFL-212ENST00000584655 FAM47E-STBD1D6RA91 191 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 ANXA2P07355 339 aaKnown RBP9.26□□□□□ -0.93
RFFL-212ENST00000584655 MSL3P1P0C860 447 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 PNMTP11086 282 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 ZNF43P17038 809 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 NUDT1P36639 197 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 GUCA1AP43080 201 aaPredicted RBP9.26□□□□□ -0.93
RFFL-212ENST00000584655 FCRLAQ7L513 359 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 NAA40Q86UY6 237 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 NR2C2APQ86WQ0 139 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 NPEPL1Q8NDH3 523 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 BHLHE23Q8NDY6 225 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 SFXN2Q96NB2 322 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 LMF2Q9BU23 707 aaKnown RBP9.26□□□□□ -0.93
RFFL-212ENST00000584655 CNOT2Q9NZN8 540 aaKnown RBP9.26□□□□□ -0.93
RFFL-212ENST00000584655 EXOSC1Q9Y3B2 195 aaKnown RBP9.26□□□□□ -0.93
RFFL-212ENST00000584655 ANXA2P2A6NMY6 339 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 NOS1APO75052 506 aaPredicted RBP9.26□□□□□ -0.93
RFFL-212ENST00000584655 SNRPD2P62316 118 aaKnown RBP9.26□□□□□ -0.93
RFFL-212ENST00000584655 ZNF627Q7L945 461 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 ATG4DQ86TL0 474 aaPredicted RBP9.26□□□□□ -0.93
RFFL-212ENST00000584655 SCAIQ8N9R8 606 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 ZNF566Q969W8 418 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 ZNF845Q96IR2 970 aaPredicted RBP9.26□□□□□ -0.93
RFFL-212ENST00000584655 DCBLD2Q96PD2 775 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 C14orf105Q9NVL8 296 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 SLC5A6Q9Y289 635 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 FRG2CA6NGY1 282 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 RER1O15258 196 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 MLLT11Q13015 90 aaPredicted RBP9.26□□□□□ -0.93
RFFL-212ENST00000584655 PLA2G7Q13093 441 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 IGFBP7Q16270 282 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 OCLNQ16625 522 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 ZFP69Q49AA0 526 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 CDCP2Q5VXM1 449 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 WDR74Q6RFH5 385 aaPredicted RBP9.26□□□□□ -0.93
RFFL-212ENST00000584655 GID4Q8IVV7 300 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 GCNT2Q8N0V5 402 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 CT55Q8WUE5 264 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 ARHGAP9Q9BRR9 750 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 FUZQ9BT04 418 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 NEK6Q9HC98 313 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 GPR27Q9NS67 375 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 MMACHCQ9Y4U1 282 aa9.26□□□□□ -0.93
RFFL-212ENST00000584655 KALRNO60229 2985 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 CENPXA8MT69 81 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 CXCL13O43927 109 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 PPM1BO75688 479 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 ZNF205O95201 554 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 TMIGD3P0DMS9 266 aaPredicted RBP9.25□□□□□ -0.93
RFFL-212ENST00000584655 ELK1P19419 428 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 P2RX1P51575 399 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 BEST3Q8N1M1 668 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 DVL3Q92997 716 aaPredicted RBP9.25□□□□□ -0.93
RFFL-212ENST00000584655 ZNF837Q96EG3 531 aaPredicted RBP9.25□□□□□ -0.93
RFFL-212ENST00000584655 SLC34A2O95436 690 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 SIRPAP78324 504 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 PUDPQ08623 228 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 TMEM91Q6ZNR0 172 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 VASH1Q7L8A9 365 aaPredicted RBP9.25□□□□□ -0.93
RFFL-212ENST00000584655 GALNTL5Q7Z4T8 443 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 GLB1L2Q8IW92 636 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 ARHGEF39Q8N4T4 335 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 MROQ9BYG7 248 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 PTGES2Q9H7Z7 377 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 ERVMER34-1Q9H9K5 563 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 CALHM2Q9HA72 323 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 UGT2A1Q9Y4X1 527 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 MN1Q10571 1320 aaPredicted RBP9.25□□□□□ -0.93
RFFL-212ENST00000584655 SAGE2PA6NJ88 616 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 NKX2-8O15522 239 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 CASP3P42574 277 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 HSD17B12Q53GQ0 312 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 FAM69AQ5T7M9 428 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 ZCCHC12Q6PEW1 402 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 TMPRSS11FQ6ZWK6 438 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 NDUFAF7Q7L592 441 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 ZSCAN1Q8NBB4 408 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 INTS14Q96SY0 518 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 GPER1Q99527 375 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 LDAHQ9H6V9 325 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 PLCXD1Q9NUJ7 323 aa9.25□□□□□ -0.93
RFFL-212ENST00000584655 ABCA1O95477 2261 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 ZNF670-ZNF695F2Z2N8 137 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 ZNF701M0R085 212 aaPredicted RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 LANCL1O43813 399 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 EFNA2O43921 213 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 LYPD3O95274 346 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 P04436 131 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 EIF4EP06730 217 aaKnown RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 UMODP07911 640 aa9.24□□□□□ -0.93
RFFL-212ENST00000584655 UBE2MP61081 183 aaKnown RBP9.24□□□□□ -0.93
RFFL-212ENST00000584655 FGD2Q7Z6J4 655 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms