RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZNF229Q9UJW7 825 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 BAG5Q9UL15 447 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 SLC7A7Q9UM01 511 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 SPEF1Q9Y4P9 236 aa9.61□□□□□ -0.87
CCDC47-206ENST00000584112 ZNF503-AS2A6NEH8 195 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 KPNA4O00629 521 aaPredicted RBP9.6□□□□□ -0.87
CCDC47-206ENST00000584112 FBP2O00757 339 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 RNF13O43567 381 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 SASH3O75995 380 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 LY6HO94772 140 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 UBL3O95164 117 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 LYPD3O95274 346 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 RAB36O95755 333 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 CH25HO95992 272 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 IFNA14P01570 189 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 HLA-HP01893 362 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 UMPSP11172 480 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 IFNGR1P15260 489 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 B4GALT1P15291 398 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 THBS4P35443 961 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 GZMKP49863 264 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 GZMMP51124 257 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 ARFIP2P53365 341 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 LSM11P83369 360 aaKnown RBP eCLIP9.6□□□□□ -0.87
CCDC47-206ENST00000584112 SNTB2Q13425 540 aaKnown RBP9.6□□□□□ -0.87
CCDC47-206ENST00000584112 RABL3Q5HYI8 236 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 WDR88Q6ZMY6 472 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 SLC35D2Q76EJ3 337 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 PIWIL3Q7Z3Z3 882 aaKnown RBP9.6□□□□□ -0.87
CCDC47-206ENST00000584112 NANOGNBQ7Z5D8 188 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 RBM45Q8IUH3 476 aaKnown RBP9.6□□□□□ -0.87
CCDC47-206ENST00000584112 PCYOX1LQ8NBM8 494 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 OR4D11Q8NGI4 311 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 NEU4Q8WWR8 484 aaPredicted RBP9.6□□□□□ -0.87
CCDC47-206ENST00000584112 ZNF566Q969W8 418 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 LRRC58Q96CX6 371 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 NOX3Q9HBY0 568 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 GID8Q9NWU2 228 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 CMAHPQ9Y471 501 aa9.6□□□□□ -0.87
CCDC47-206ENST00000584112 VWC2LB2RUY7 222 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 MRASO14807 208 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 PIN1P1O15428 100 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 IGF2P01344 180 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 THY1P04216 161 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 ASAH2BP0C7U1 165 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 ZNF14P17017 642 aaPredicted RBP9.59□□□□□ -0.87
CCDC47-206ENST00000584112 NR4A1P22736 598 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 LSP1P33241 339 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 RBM34P42696 430 aaKnown RBP9.59□□□□□ -0.87
CCDC47-206ENST00000584112 NR4A2P43354 598 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 PTDSS1P48651 473 aaKnown RBP9.59□□□□□ -0.87
CCDC47-206ENST00000584112 TAS2R41P59536 307 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 RPS23P62266 143 aaKnown RBP9.59□□□□□ -0.87
CCDC47-206ENST00000584112 RAB1AP62820 205 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 GALK2Q01415 458 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 PIGFQ07326 219 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 KLF10Q13118 480 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 GGTLC2Q14390 218 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 CARTPTQ16568 116 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 REP15Q6BDI9 236 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 KRT80Q6KB66 452 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 Q6ZPA2 131 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 HDDC2Q7Z4H3 204 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 SPATA21Q7Z572 469 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 PEG10Q86TG7 708 aaKnown RBP9.59□□□□□ -0.87
CCDC47-206ENST00000584112 CARM1Q86X55 608 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 CALHM3Q86XJ0 350 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 ANKS4BQ8N8V4 417 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 TMEM54Q969K7 222 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 SLC25A44Q96H78 314 aaPredicted RBP9.59□□□□□ -0.87
CCDC47-206ENST00000584112 DYNLRB1Q9NP97 96 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 SAR1AQ9NR31 198 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 FGFR1OP2Q9NVK5 253 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 TAS2R5Q9NYW4 299 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 GLTPQ9NZD2 209 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 SH3GLB1Q9Y371 365 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 WNK2Q9Y3S1 2297 aa9.59□□□□□ -0.87
CCDC47-206ENST00000584112 SACSQ9NZJ4 4579 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 A0A1W2PRG6 482 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 MCIDASD6RGH6 385 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 BLOC1S5-TXNDC5H3BN57 136 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 FXYD1O00168 92 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 OR5F1O95221 314 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 FARS2O95363 451 aaKnown RBP9.58□□□□□ -0.88
CCDC47-206ENST00000584112 BCL10O95999 233 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 IGHG1P01857 330 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 MT-ND1P03886 318 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 OR8G3PP0DMU2 310 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 THRBP10828 461 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 IFNA8P32881 189 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 GLRXP35754 106 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 EVX1P49640 407 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 CRYBA2P53672 197 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 CLRN1P58418 232 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 MELKQ14680 651 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 IQCCQ4KMZ1 466 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 DEF8Q6ZN54 512 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 DPPA2Q7Z7J5 298 aa9.58□□□□□ -0.88
CCDC47-206ENST00000584112 TSPYL5Q86VY4 417 aaPredicted RBP9.58□□□□□ -0.88
CCDC47-206ENST00000584112 WDFY1Q8IWB7 410 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms