RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 HOXD4P09016 255 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 SAGP10523 405 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 ST3GAL3Q11203 375 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 TP53I3Q53FA7 332 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 NPSR1Q6W5P4 371 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 PPP1R3BQ86XI6 285 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 SLC22A18ASQ8N1D0 253 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 ZNF655Q8N720 491 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 OR5T3Q8NGG3 340 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 OR2L8Q8NGY9 312 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 TRMT10AQ8TBZ6 339 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 CPT1CQ8TCG5 803 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 C4orf36Q96KX1 117 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 ZNF681Q96N22 645 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 PIMREGQ9BSJ6 248 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 MARVELD1Q9BSK0 173 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 FAIM2Q9BWQ8 316 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 OR52D1Q9H346 318 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 FN3KQ9H479 309 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 UNKLQ9H9P5 680 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 SDHAF2Q9NX18 166 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 COLEC10Q9Y6Z7 277 aa10.59□□□□□ -0.71
CDK5RAP3-231ENST00000584063 PQLC2LA1A4F0 135 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 FAM171A2A8MVW0 826 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 KDM4EB2RXH2 506 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 LRRN3E7EW58 273 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CHP2O43745 196 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 HCN1O60741 890 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CTSVO60911 334 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 IGHV4-34P06331 123 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 DCNP07585 359 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ADRB1P08588 477 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 STAG3L2P0CL84 134 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 TEAD1P28347 426 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 NAA10P41227 235 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 MAP3K8P41279 467 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CLDN12P56749 244 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 FXYD6P3P58550 94 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SF3A2Q15428 464 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 OTPQ5XKR4 325 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 PET117Q6UWS5 81 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SLC16A13Q7RTY0 426 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 TCTE3Q8IZS6 198 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 TMEM52Q8NDY8 209 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 OR5J2Q8NH18 312 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 GAL3ST4Q96RP7 486 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 LRRN3Q9H3W5 708 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 EXO5Q9H790 373 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 NLGN3Q9NZ94 848 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 AK6Q9Y3D8 172 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 OR2W5A6NFC9 320 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ERCC1P07992 297 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 GUSBP08236 651 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ANKRD34CP0C6C1 535 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 DRD2P14416 443 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CSNK2A2P19784 350 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 GSTM3P21266 225 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 FGF9P31371 208 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 PPP1CAP62136 330 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 RBX1P62877 108 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 BTN1A1Q13410 526 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 TMEM81Q6P7N7 255 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ZNF620Q6ZNG0 422 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 RASSF6Q6ZTQ3 369 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 OR2T33Q8NG76 320 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 OR4D6Q8NGJ1 314 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 OR5W2Q8NH69 310 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 EDAQ92838 391 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 DIRC2Q96SL1 478 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 TIMP4Q99727 224 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 NKX3-1Q99801 234 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SOSTQ9BQB4 213 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 PCBD2Q9H0N5 130 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 AUNIPQ9H7T9 357 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 GLTPQ9NZD2 209 aa10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 MYEF2Q9P2K5 600 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ZNF346Q9UL40 294 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ASCC3Q8N3C0 2202 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ZNF891A8MT65 544 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 B4DGG1 531 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 I3L521 148 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 HCRTR1O43613 425 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 RD3LP0DJH9 198 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CPT2P23786 658 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 MC5RP33032 325 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 PSMB10P40306 273 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 CAPZBP47756 277 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 RUNX2Q13950 521 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 DUSP5Q16690 384 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 NDUFA9Q16795 377 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ARHGAP40Q5TG30 622 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SLC25A25Q6KCM7 469 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 SIAH3Q8IW03 269 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ZNF687Q8N1G0 1237 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 C9orf62Q8N4C0 152 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 DEFB123Q8N688 67 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 ACBD7Q8N6N7 88 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 DUSP18Q8NEJ0 188 aa10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 WDR89Q96FK6 387 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-231ENST00000584063 PEX11GQ96HA9 241 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms