RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ATP5F1P24539 256 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 CXCR1P25024 350 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 CDC25BP30305 580 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 MPV17P39210 176 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 UCP2P55851 309 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 PCBP3P57721 371 aaKnown RBP6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 BPIFB3P59826 476 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 RPL38P63173 70 aaKnown RBP6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 HBA1P69905 142 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 CD69Q07108 199 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 C2orf54Q08AI8 447 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 CALCOCO2Q13137 446 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 CAMK2DQ13557 499 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 LARS2Q15031 903 aaKnown RBP6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 DEFB121Q5J5C9 76 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 GPR157Q5UAW9 335 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 CARD17Q5XLA6 110 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 ZDHHC24Q6UX98 284 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 NHLRC1Q6VVB1 395 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 C16orf62Q7Z3J2 963 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 C6orf120Q7Z4R8 191 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 LDLRAD3Q86YD5 345 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 LYG1Q8N1E2 194 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 FITM2Q8N6M3 262 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 ZNF283Q8N7M2 679 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 PLPP7Q8NBV4 271 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 IPCEF1Q8WWN9 437 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 MOAP1Q96BY2 351 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 ROPN1LQ96C74 230 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 OXGR1Q96P68 337 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 FOXB1Q99853 325 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 B9D2Q9BPU9 175 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 ERP44Q9BS26 406 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 EMC6Q9BV81 110 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 SSBP3Q9BWW4 388 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 MMP28Q9H239 520 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 TUBB1Q9H4B7 451 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 PCDHGB5Q9Y5G0 923 aa6.37□□□□□ -1.39
SMARCE1-217ENST00000580654 A0A0U1RQK1 487 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 CENPVL3A0A0U1RRI6 287 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 LCE6AA0A183 80 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 DUXAA6NLW8 204 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 LSM1O15116 133 aaKnown RBP6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 SNAP29O95721 258 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 HPRP00739 348 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 C1QCP02747 245 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 OR12D1P0DN82 309 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 HLA-DOBP13765 273 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 TAC1P20366 129 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 DRD4P21917 467 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 LSP1P33241 339 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 ACAA2P42765 397 aaKnown RBP6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 KRTAP10-11P60412 298 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 EGR4Q05215 589 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 BST1Q10588 318 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 PMS2P3Q13401 168 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 MOGQ16653 247 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 GSTA3Q16772 222 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 COX20Q5RI15 118 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 CASC10Q5T4H9 136 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 DHRS7BQ6IAN0 325 aaPredicted RBP6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 SLC35E4Q6ICL7 350 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 GDPGP1Q6ZNW5 385 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 Q6ZTK2 550 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 MUC20Q8N307 709 aaPredicted RBP6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 ICA1LQ8NDH6 482 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 OR1J1Q8NGS3 322 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 MFSD8Q8NHS3 518 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 MIPOL1Q8TD10 442 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 SLC25A36Q96CQ1 311 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 COQ8BQ96D53 544 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 SLC35G5Q96KT7 338 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 TBX15Q96SF7 602 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 ARHGDIGQ99819 225 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 NUDT16L1Q9BRJ7 211 aaKnown RBP6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 CDADC1Q9BWV3 514 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 EGLN1Q9GZT9 426 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 TMEM165Q9HC07 324 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 POLE3Q9NRF9 147 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 FBXL3Q9UKT7 428 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 POFUT2Q9Y2G5 429 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 SIGLEC9Q9Y336 463 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 GPR45Q9Y5Y3 372 aa6.36□□□□□ -1.39
SMARCE1-217ENST00000580654 CSMD3Q7Z407 3707 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 TMEM238LA0A1B0GVL6 79 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 CFAP73A6NFT4 308 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 MS4A18H0YCH9 400 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 SLC28A1O00337 649 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 GKN3PP0CG01 181 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 MMP9P14780 707 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 IGLL1P15814 213 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 RPS4Y1P22090 263 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 SOAT1P35610 550 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 CFHR2P36980 270 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 HPCAL1P37235 193 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 MDH2P40926 338 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 RPS5P46782 204 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 EFNB2P52799 333 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 PLTPP55058 493 aa6.35□□□□□ -1.39
SMARCE1-217ENST00000580654 GNB2P62879 340 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms