RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 PLPP1O14494 284 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 BCAT2O15382 392 aaPredicted RBP19.66■□□□□ 0.74
PTPRM-211ENST00000580170 GLCEO94923 617 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 ELK1P19419 428 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 ZNF93P35789 620 aaPredicted RBP19.66■□□□□ 0.74
PTPRM-211ENST00000580170 HOXA1P49639 335 aaPredicted RBP19.66■□□□□ 0.74
PTPRM-211ENST00000580170 FAM26DQ5JW98 314 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 PRSS45Q7RTY3 260 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 WFDC5Q8TCV5 224 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 SCAF4O95104 1147 aaKnown RBP19.66■□□□□ 0.74
PTPRM-211ENST00000580170 CER1O95813 267 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 B3GALT4O96024 378 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 MGST1P10620 155 aaKnown RBP19.66■□□□□ 0.74
PTPRM-211ENST00000580170 ZBTB44Q8NCP5 570 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 GPR78Q96P69 363 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 SIGLEC6O43699 453 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 LIM2P55344 173 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 GABREP78334 506 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 ATPAF1Q5TC12 328 aaPredicted RBP19.66■□□□□ 0.74
PTPRM-211ENST00000580170 FAM174AQ8TBP5 190 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 PPP1R14DQ9NXH3 145 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 OR52A1Q9UKL2 312 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 IMPA2O14732 288 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 SLC16A11Q8NCK7 471 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 SLC25A46Q96AG3 418 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 FYTTD1Q96QD9 318 aaKnown RBP19.66■□□□□ 0.74
PTPRM-211ENST00000580170 PISDQ9UG56 409 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 PCDHB10Q9UN67 800 aa19.66■□□□□ 0.74
PTPRM-211ENST00000580170 GPR55Q9Y2T6 319 aaPredicted RBP19.66■□□□□ 0.74
PTPRM-211ENST00000580170 DCDP81605 110 aaKnown RBP19.65■□□□□ 0.74
PTPRM-211ENST00000580170 BAXQ07812 192 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 CTRCQ99895 268 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 ZMAT3Q9HA38 289 aaKnown RBP19.65■□□□□ 0.74
PTPRM-211ENST00000580170 DHCR7Q9UBM7 475 aaKnown RBP19.65■□□□□ 0.74
PTPRM-211ENST00000580170 PMS2P2O95744 297 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 CPT2P23786 658 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 ISL1P61371 349 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 MDGA2Q7Z553 956 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 ZNF75AQ96N20 296 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 RNF167Q9H6Y7 350 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 RAB22AQ9UL26 194 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 CD46P15529 392 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 HCCSP53701 268 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 NUMBLQ9Y6R0 609 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 SLC5A10A0PJK1 596 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 CD14P08571 375 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 PMPCAQ10713 525 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 CTU2Q2VPK5 515 aaKnown RBP19.65■□□□□ 0.74
PTPRM-211ENST00000580170 SAXO2Q658L1 398 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 HIST2H3AQ71DI3 136 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 RPH3ALQ9UNE2 315 aa19.65■□□□□ 0.74
PTPRM-211ENST00000580170 TMEM202A6NGA9 273 aa19.64■□□□□ 0.74
PTPRM-211ENST00000580170 G3V3Y1 287 aa19.64■□□□□ 0.74
PTPRM-211ENST00000580170 H3BNC9 293 aa19.64■□□□□ 0.74
PTPRM-211ENST00000580170 TSFMP43897 325 aaKnown RBP19.64■□□□□ 0.74
PTPRM-211ENST00000580170 BDH1Q02338 343 aa19.64■□□□□ 0.74
PTPRM-211ENST00000580170 PDZD11Q5EBL8 140 aa19.64■□□□□ 0.74
PTPRM-211ENST00000580170 SLC43A2Q8N370 569 aa19.64■□□□□ 0.74
PTPRM-211ENST00000580170 GAB2Q9UQC2 676 aa19.64■□□□□ 0.74
PTPRM-211ENST00000580170 OGFOD3Q6PK18 319 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 TMX2-CTNND1H3BSU7 103 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 GRAMD2AQ8IUY3 354 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 PHYHIPQ92561 330 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 SLCO5A1Q9H2Y9 848 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 PHF1O43189 567 aaPredicted RBP19.64■□□□□ 0.73
PTPRM-211ENST00000580170 CCR9P51686 369 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 LPCAT3Q6P1A2 487 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 WDR5BQ86VZ2 330 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 UHRF2Q96PU4 802 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 DCLRE1CQ96SD1 692 aaKnown RBP19.64■□□□□ 0.73
PTPRM-211ENST00000580170 SBK2P0C263 348 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 CLINT1Q14677 625 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 SYT14P1Q58G82 188 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 DCXRQ7Z4W1 244 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 NKAIN4Q8IVV8 208 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 FAM58AQ8N1B3 248 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 NKAIN3Q8N8D7 197 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 C20orf24Q9BUV8 137 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 MUTYHQ9UIF7 546 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 A3GALT2U3KPV4 340 aa19.64■□□□□ 0.73
PTPRM-211ENST00000580170 PRAMEF4O60810 478 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 NXPH3O95157 252 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 ICAM2P13598 275 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 DPP4P27487 766 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 TM4SF4P48230 202 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 C1QTNF3Q9BXJ4 246 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 TIMM8AO60220 97 aaPredicted RBP19.63■□□□□ 0.73
PTPRM-211ENST00000580170 CTNSO60931 367 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 PIPP12273 146 aaPredicted RBP19.63■□□□□ 0.73
PTPRM-211ENST00000580170 ANXA7P20073 488 aaKnown RBP19.63■□□□□ 0.73
PTPRM-211ENST00000580170 BTG1P62324 171 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 SRPXP78539 464 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 OR1E3Q8WZA6 343 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 SH3BGRL2Q9UJC5 107 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.63■□□□□ 0.73
PTPRM-211ENST00000580170 KPTNQ9Y664 436 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 URGCP-MRPS24S4R325 110 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 TMEM221A6NGB7 291 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 BCKDHBP21953 392 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 OR4N2Q8NGD1 307 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms