RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 RAB1CQ92928 201 aa15.33■□□□□ 0.04
MKS1-209ENST00000580127 TMEM54Q969K7 222 aa15.33■□□□□ 0.04
MKS1-209ENST00000580127 YIPF5Q969M3 257 aa15.33■□□□□ 0.04
MKS1-209ENST00000580127 SLC25A44Q96H78 314 aaPredicted RBP15.33■□□□□ 0.04
MKS1-209ENST00000580127 MCHR1Q99705 422 aa15.33■□□□□ 0.04
MKS1-209ENST00000580127 SUCNR1Q9BXA5 334 aa15.33■□□□□ 0.04
MKS1-209ENST00000580127 NANSQ9NR45 359 aa15.33■□□□□ 0.04
MKS1-209ENST00000580127 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.33■□□□□ 0.04
MKS1-209ENST00000580127 ANGPT4Q9Y264 503 aa15.33■□□□□ 0.04
MKS1-209ENST00000580127 GMEB1Q9Y692 573 aa15.33■□□□□ 0.04
MKS1-209ENST00000580127 USH1CQ9Y6N9 552 aa15.33■□□□□ 0.04
MKS1-209ENST00000580127 V9GYY5 206 aaPredicted RBP15.33■□□□□ 0.04
MKS1-209ENST00000580127 SVEP1Q4LDE5 3571 aa15.33■□□□□ 0.04
MKS1-209ENST00000580127 J3QLI3 93 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 RNF13O43567 381 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 ZNF250P15622 560 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 GPX2P18283 190 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 EPHA1P21709 976 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 CRYBB2P43320 205 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 ZNF84P51523 738 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 CCL8P80075 99 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 ZP4Q12836 540 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 MSMPQ1L6U9 139 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 HFEQ30201 348 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 FAM209AQ5JX71 171 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 TTC33Q6PID6 262 aaPredicted RBP15.32■□□□□ 0.04
MKS1-209ENST00000580127 EPGNQ6UW88 154 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 PEG10Q86TG7 708 aaKnown RBP15.32■□□□□ 0.04
MKS1-209ENST00000580127 CARM1Q86X55 608 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 CPEB3Q8NE35 698 aaKnown RBP15.32■□□□□ 0.04
MKS1-209ENST00000580127 SEMA6DQ8NFY4 1073 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 SPDL1Q96EA4 605 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 ZNF665Q9H7R5 613 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 TCF7L2Q9NQB0 619 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 SLC25A37Q9NYZ2 338 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 ZNF224Q9NZL3 707 aa15.32■□□□□ 0.04
MKS1-209ENST00000580127 MYEF2Q9P2K5 600 aaKnown RBP15.32■□□□□ 0.04
MKS1-209ENST00000580127 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.32■□□□□ 0.04
MKS1-209ENST00000580127 WNK2Q9Y3S1 2297 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 IGHV1-69-2A0A0G2JMI3 117 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 TMEM89A2RUT3 159 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 DHHO43323 396 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 CDC14BO60729 498 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 MPZL1O95297 269 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 FAM157BP0CG42 384 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 GATA3P23771 443 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 FPR2P25090 351 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 MRPL19P49406 292 aaKnown RBP15.31■□□□□ 0.04
MKS1-209ENST00000580127 UCP2P55851 309 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 HILS1P60008 231 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 NRN1LQ496H8 165 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 THSD4Q6ZMP0 1018 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 SLC16A14Q7RTX9 510 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 HDDC2Q7Z4H3 204 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 NANPQ8TBE9 248 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 TMEM38BQ9NVV0 291 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 CCDC167Q9P0B6 97 aa15.31■□□□□ 0.04
MKS1-209ENST00000580127 CHP2O43745 196 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 RP2O75695 350 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 SNAP29O95721 258 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 CH25HO95992 272 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 QDPRP09417 244 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 PATE4P0C8F1 98 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 AQP1P29972 269 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 MAGEB1P43366 347 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 CLRN1P58418 232 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 MVKQ03426 396 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 ALKBH6Q3KRA9 238 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 LRFN4Q6PJG9 635 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 LINC00114Q6XXX2 140 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 RETREG3Q86VR2 466 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 BPIFB2Q8N4F0 458 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 C11orf65Q8NCR3 313 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 ZBTB9Q96C00 473 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 MPP4Q96JB8 637 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 SH3GL3Q99963 347 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 SLC19A3Q9BZV2 496 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 RABEP2Q9H5N1 569 aa15.3■□□□□ 0.04
MKS1-209ENST00000580127 EIF3KQ9UBQ5 218 aaKnown RBP15.3■□□□□ 0.04
MKS1-209ENST00000580127 IGLV3-9A0A075B6K5 115 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 A0A1W2PRG6 482 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 CLDN25C9JDP6 229 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 WNT9BO14905 357 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 MFN2O95140 757 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 IGHG1P01857 330 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 UMPSP11172 480 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 HOXB9P17482 250 aaPredicted RBP15.29■□□□□ 0.04
MKS1-209ENST00000580127 APLNRP35414 380 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 MAGOHP61326 146 aaKnown RBP15.29■□□□□ 0.04
MKS1-209ENST00000580127 HSF2Q03933 536 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 SLC3A1Q07837 685 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 DCAF12L2Q5VW00 463 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 RBMS3Q6XE24 437 aaKnown RBP15.29■□□□□ 0.04
MKS1-209ENST00000580127 MAVSQ7Z434 540 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 ZNF584Q8IVC4 421 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 SLC30A8Q8IWU4 369 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 C1orf174Q8IYL3 243 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 ICA1LQ8NDH6 482 aa15.29■□□□□ 0.04
MKS1-209ENST00000580127 RBM15BQ8NDT2 890 aaKnown RBP15.29■□□□□ 0.04
MKS1-209ENST00000580127 OR4K5Q8NGD3 323 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms