RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 FAM57AQ8TBR7 257 aa7.12□□□□□ -1.27
COPS3-215ENST00000578317 DNAJA3Q96EY1 480 aa7.12□□□□□ -1.27
COPS3-215ENST00000578317 ADAD1Q96M93 576 aaKnown RBP7.12□□□□□ -1.27
COPS3-215ENST00000578317 ERMAPQ96PL5 475 aaPredicted RBP7.12□□□□□ -1.27
COPS3-215ENST00000578317 CDIP1Q9H305 208 aa7.12□□□□□ -1.27
COPS3-215ENST00000578317 FN3KQ9H479 309 aa7.12□□□□□ -1.27
COPS3-215ENST00000578317 KLHL9Q9P2J3 617 aa7.12□□□□□ -1.27
COPS3-215ENST00000578317 CLCF1Q9UBD9 225 aa7.12□□□□□ -1.27
COPS3-215ENST00000578317 TNFRSF10DQ9UBN6 386 aa7.12□□□□□ -1.27
COPS3-215ENST00000578317 GRHPRQ9UBQ7 328 aa7.12□□□□□ -1.27
COPS3-215ENST00000578317 IL20RAQ9UHF4 553 aa7.12□□□□□ -1.27
COPS3-215ENST00000578317 FBXL7Q9UJT9 491 aa7.12□□□□□ -1.27
COPS3-215ENST00000578317 ING1Q9UK53 422 aaPredicted RBP7.12□□□□□ -1.27
COPS3-215ENST00000578317 EML6Q6ZMW3 1958 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 TNRC6AQ8NDV7 1962 aaKnown RBP7.11□□□□□ -1.27
COPS3-215ENST00000578317 CFAP46Q8IYW2 2715 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 CHD6Q8TD26 2715 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 A6NIZ1 184 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 SLC22A20A6NK97 555 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 PRRG2O14669 202 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 RAMP1O60894 148 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 ZNF432O94892 652 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 PPP1R3DO95685 299 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 BCL10O95999 233 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 IFNGP01579 166 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 YES1P07947 543 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 GNAO1P09471 354 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 HIST1H1CP16403 213 aaKnown RBP7.11□□□□□ -1.27
COPS3-215ENST00000578317 GABRB1P18505 474 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 KLK2P20151 261 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 RAP1BP61224 184 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 RAP1AP62834 184 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 ERVK-25P63136 954 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 RBPJQ06330 500 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 RASGEF1BQ0VAM2 473 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 MED21Q13503 144 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 C1DQ13901 141 aaKnown RBP7.11□□□□□ -1.27
COPS3-215ENST00000578317 SNAPC1Q16533 368 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 ACSF3Q4G176 576 aaPredicted RBP7.11□□□□□ -1.27
COPS3-215ENST00000578317 GFRALQ6UXV0 394 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 SLC35D2Q76EJ3 337 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 HDDC2Q7Z4H3 204 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 ADCK1Q86TW2 530 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 C8orf59Q8N0T1 100 aaPredicted RBP7.11□□□□□ -1.27
COPS3-215ENST00000578317 IQCF1Q8N6M8 205 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 NPEPL1Q8NDH3 523 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 ST6GALNAC3Q8NDV1 305 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 ZNF519Q8TB69 540 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 FNDC9Q8TBE3 224 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 FNDC8Q8TC99 324 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 CPT1CQ8TCG5 803 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 ASB10Q8WXI3 467 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 ROBO4Q8WZ75 1007 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 INTS12Q96CB8 462 aaKnown RBP7.11□□□□□ -1.27
COPS3-215ENST00000578317 SLC25A44Q96H78 314 aaPredicted RBP7.11□□□□□ -1.27
COPS3-215ENST00000578317 LRR1Q96L50 414 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 KCNJ15Q99712 375 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 MRPL13Q9BYD1 178 aaKnown RBP7.11□□□□□ -1.27
COPS3-215ENST00000578317 PNPLA3Q9NST1 481 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 ZNF226Q9NYT6 803 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 TVP23BQ9NYZ1 205 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 KLHL21Q9UJP4 597 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 RCE1Q9Y256 329 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 ADAM18Q9Y3Q7 739 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 FLVCR1Q9Y5Y0 555 aa7.11□□□□□ -1.27
COPS3-215ENST00000578317 MED12Q93074 2177 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 IGHV3-15A0A0B4J1V0 119 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 PRSS37A4D1T9 235 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 MBD3L4A6NDZ8 208 aaPredicted RBP7.1□□□□□ -1.27
COPS3-215ENST00000578317 MBD3L3A6NE82 208 aaPredicted RBP7.1□□□□□ -1.27
COPS3-215ENST00000578317 MBD3L5A6NJ08 208 aaPredicted RBP7.1□□□□□ -1.27
COPS3-215ENST00000578317 C11orf98E9PRG8 122 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 M0R3G1 203 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 TLX2O43763 284 aaPredicted RBP7.1□□□□□ -1.27
COPS3-215ENST00000578317 AQP8O94778 261 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 CLIC3O95833 236 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 TGM6O95932 706 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 TIMP3P35625 211 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 CDKN2AP42771 156 aaKnown RBP7.1□□□□□ -1.27
COPS3-215ENST00000578317 SLC25A1P53007 311 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 CXCR4P61073 352 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 CSNK2BP67870 215 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 POU3F1Q03052 451 aaPredicted RBP7.1□□□□□ -1.27
COPS3-215ENST00000578317 ITGADQ13349 1161 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 GUSBP1Q15486 140 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 C3AR1Q16581 482 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 HIST3H3Q16695 136 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 PRR30Q53SZ7 412 aaPredicted RBP7.1□□□□□ -1.27
COPS3-215ENST00000578317 AADACL4Q5VUY2 407 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 MEDAGQ5VYS4 303 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 OR2A2Q6IF42 318 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 PTCHD4Q6ZW05 846 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 GPAT4Q86UL3 456 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 IGFN1Q86VF2 1251 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 DOLPP1Q86YN1 238 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 ENTHD1Q8IYW4 607 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 CLRN3Q8NCR9 226 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 OR5M9Q8NGP3 310 aa7.1□□□□□ -1.27
COPS3-215ENST00000578317 MBD3L2Q8NHZ7 208 aaPredicted RBP7.1□□□□□ -1.27
COPS3-215ENST00000578317 FAM81AQ8TBF8 368 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms