RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 BPESC1Q9GZL8 116 aa12.49□□□□□ -0.41
SMARCE1-213ENST00000578044 MEPEQ9NQ76 525 aaPredicted RBP12.49□□□□□ -0.41
SMARCE1-213ENST00000578044 GPR160Q9UJ42 338 aa12.49□□□□□ -0.41
SMARCE1-213ENST00000578044 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
SMARCE1-213ENST00000578044 ZNF346Q9UL40 294 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-213ENST00000578044 RNF13O43567 381 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 LILRA1O75019 489 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 BCL10O95999 233 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 OPN1SWP03999 348 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 CD79AP11912 226 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 PCMT1P22061 227 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 GIPRP48546 466 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 DAP3P51398 398 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 TMEM33P57088 247 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 GALK2Q01415 458 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 GGTLC2Q14390 218 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 FAM209AQ5JX71 171 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 CARD17Q5XLA6 110 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 VHLLQ6RSH7 139 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 NANOGNBQ7Z5D8 188 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 TSPYL5Q86VY4 417 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 LSRQ86X29 649 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 RBM45Q8IUH3 476 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 SVOPLQ8N434 492 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 ANKS4BQ8N8V4 417 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 FAM156AQ8NDB6 213 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 OR1J2Q8NGS2 313 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 ZNF583Q96ND8 569 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 CCDC134Q9H6E4 229 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 CHODLQ9H9P2 273 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 DYNLRB1Q9NP97 96 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 GID8Q9NWU2 228 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 NKIRAS2Q9NYR9 191 aa12.48□□□□□ -0.41
SMARCE1-213ENST00000578044 IGLV3-9A0A075B6K5 115 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 LOC100289279A0A1B0GTE1 492 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 A0A1W2PRG6 482 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 ICMTO60725 284 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 ZNF250P15622 560 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 ZNF16P17020 682 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 IGFBP5P24593 272 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 PTDSS1P48651 473 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 MOGQ16653 247 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 SLC36A2Q495M3 483 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 TMEM53Q6P2H8 277 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 UNQ6126/PRO20091Q6UXV3 157 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 ARPINQ7Z6K5 226 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 CARM1Q86X55 608 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 ZNF584Q8IVC4 421 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 WDFY1Q8IWB7 410 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 SKA3Q8IX90 412 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 MS4A3Q96HJ5 214 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 WACQ9BTA9 647 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 TMEM120AQ9BXJ8 343 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 MRPL37Q9BZE1 423 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 BCL2L14Q9BZR8 327 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 RACGAP1Q9H0H5 632 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 SAR1AQ9NR31 198 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 REV1Q9UBZ9 1251 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 RIMS3Q9UJD0 308 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 WNK2Q9Y3S1 2297 aa12.47□□□□□ -0.41
SMARCE1-213ENST00000578044 ANK2Q01484 3957 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 RNF212BA8MTL3 300 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 FAM220BPB1ANY3 271 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 C11orf98E9PRG8 122 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 SEC14L2O76054 403 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 OR7A10O76100 309 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 ADRA2AP08913 450 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 QDPRP09417 244 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 SRD5A1P18405 259 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 FUT1P19526 365 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 ACHEP22303 614 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 IFNA8P32881 189 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 RAD52P43351 418 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 ZNF84P51523 738 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 UGT2B15P54855 530 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 SELENOVP59797 346 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 SELENOWP63302 87 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 MRPS34P82930 218 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 RPL18Q07020 188 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 KLF10Q13118 480 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 PCGF3Q3KNV8 242 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 IQCCQ4KMZ1 466 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 RABL3Q5HYI8 236 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 FAM120AOSQ5T036 256 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 ARMC4Q5T2S8 1044 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 FAM205BPQ63HN1 556 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 KRT80Q6KB66 452 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 CDK20Q8IZL9 346 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 LRRC17Q8N6Y2 441 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 LINC01356Q8N9X3 169 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 NOXO1Q8NFA2 376 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 VANGL1Q8TAA9 524 aaPredicted RBP12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 ZNF519Q8TB69 540 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 TMEM239Q8WW34 195 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 ASB10Q8WXI3 467 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 RDH5Q92781 318 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 NMD3Q96D46 503 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 LRMDAQ9H2I8 198 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 SIAEQ9HAT2 523 aa12.46□□□□□ -0.41
SMARCE1-213ENST00000578044 HIF3AQ9Y2N7 669 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms