RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CALML5Q9NZT1 146 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 KLHL14Q9P2G3 628 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 RPS6KB2Q9UBS0 482 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 EGFL7Q9UHF1 273 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 PURGQ9UJV8 347 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 PPIAL4EA0A075B759 164 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 PPIAL4CA0A0B4J2A2 164 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 PPIAL4DF5H284 164 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 RFXANKO14593 260 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 FOXH1O75593 365 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 UBOX5O94941 541 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 IGHV1-46P01743 117 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 BGLAPP02818 100 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 ALDOCP09972 364 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 NUDT7P0C024 238 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 SBK2P0C263 348 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 PPIAL4FP0DN26 164 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 DRD4P21917 467 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 GCH1P30793 250 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 CSNK1A1P48729 337 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 ZNF81P51508 661 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 BIDP55957 195 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 DSTNP60981 165 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 SEC61A1P61619 476 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 PMS2P3Q13401 168 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 OCLNQ16625 522 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 GTDC1Q4AE62 458 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 TMEM255AQ5JRV8 349 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 C16orf87Q6PH81 154 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 LRFN4Q6PJG9 635 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 C6orf89Q6UWU4 347 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 CROCCP2Q86T23 111 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 COMTD1Q86VU5 262 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 ADPRHL1Q8NDY3 354 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 OR1J1Q8NGS3 322 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 TMEM54Q969K7 222 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 ELMOD3Q96FG2 381 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 MOGAT1Q96PD6 335 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 MS4A7Q9GZW8 240 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 ARMC7Q9H6L4 198 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 ZMAT3Q9HA38 289 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 TPT1P8Q9HAU6 139 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 C12orf10Q9HB07 376 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 NPHS2Q9NP85 383 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 GLTPQ9NZD2 209 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 FBXL3Q9UKT7 428 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 IFT52Q9Y366 437 aa8.55□□□□□ -1.04
NPLOC4-220ENST00000576940 KMT2CQ8NEZ4 4911 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 MDFIC2A0A1B0GVS7 189 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 C11orf98E9PRG8 122 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 CLDN34H7C241 214 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 PLPP3O14495 311 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 RRP9O43818 475 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 SASH3O75995 380 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 IGHV3-13P01766 116 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 MYZAPP0CAP1 466 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 IGHV4-38-2P0DP08 117 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 ZNF12P17014 697 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 CCNOP22674 350 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 ETV4P43268 484 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 RPL14P50914 215 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 MMP15P51511 669 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 ABCE1P61221 599 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 PUDPQ08623 228 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 ALG10BQ5I7T1 473 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 SPATA46Q5T0L3 261 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 THEM4Q5T1C6 240 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 C5orf46Q6UWT4 87 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 SPATC1Q76KD6 591 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 PXKQ7Z7A4 578 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 SNX32Q86XE0 403 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 C1QL4Q86Z23 238 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 C10orf53Q8N6V4 93 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 LSMEM1Q8N8F7 131 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 GEMIN6Q8WXD5 167 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 MAL2Q969L2 176 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 VPS33AQ96AX1 596 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 CCT8L2Q96SF2 557 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 TMEM109Q9BVC6 243 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 ASPNQ9BXN1 380 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 BCL2L14Q9BZR8 327 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 CACYBPQ9HB71 228 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 PNPOQ9NVS9 261 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 TMEM38BQ9NVV0 291 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 ZNF281Q9Y2X9 895 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 RAP2CQ9Y3L5 183 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 INSIG2Q9Y5U4 225 aa8.54□□□□□ -1.04
NPLOC4-220ENST00000576940 TPST1O60507 370 aa8.53□□□□□ -1.04
NPLOC4-220ENST00000576940 ANP32DO95626 131 aa8.53□□□□□ -1.04
NPLOC4-220ENST00000576940 MT-ND5P03915 603 aa8.53□□□□□ -1.04
NPLOC4-220ENST00000576940 ADORA3P0DMS8 318 aa8.53□□□□□ -1.04
NPLOC4-220ENST00000576940 CD80P33681 288 aa8.53□□□□□ -1.04
NPLOC4-220ENST00000576940 MPV17P39210 176 aa8.53□□□□□ -1.04
NPLOC4-220ENST00000576940 SLC6A9P48067 706 aa8.53□□□□□ -1.04
NPLOC4-220ENST00000576940 KRTAP10-3P60369 221 aa8.53□□□□□ -1.04
NPLOC4-220ENST00000576940 MOGQ16653 247 aa8.53□□□□□ -1.04
NPLOC4-220ENST00000576940 TBC1D28Q2M2D7 210 aa8.53□□□□□ -1.04
NPLOC4-220ENST00000576940 FAM209AQ5JX71 171 aa8.53□□□□□ -1.04
NPLOC4-220ENST00000576940 TMEM53Q6P2H8 277 aa8.53□□□□□ -1.04
NPLOC4-220ENST00000576940 ULK3Q6PHR2 472 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms