RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 RPP14O95059 124 aaKnown RBP3.65□□□□□ -1.83
NUP88-213ENST00000576862 LYPD3O95274 346 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 LCA5LO95447 670 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 IGSF6O95976 241 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 MBP02144 154 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 RRASP10301 218 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 CYP11B1P15538 503 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 PSMA2P25787 234 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 DPP4P27487 766 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 OTX1P32242 354 aaPredicted RBP3.65□□□□□ -1.83
NUP88-213ENST00000576862 CD80P33681 288 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 EPHX2P34913 555 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 DRD3P35462 400 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 DLSTP36957 453 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 RPS5P46782 204 aaKnown RBP3.65□□□□□ -1.83
NUP88-213ENST00000576862 BCAP31P51572 246 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 C21orf59P57076 290 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 RPS6P62753 249 aaKnown RBP3.65□□□□□ -1.83
NUP88-213ENST00000576862 SKP1P63208 163 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 S100A12P80511 92 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 ART3Q13508 389 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 PON2Q15165 354 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 DNAL1Q4LDG9 190 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 CTSL3PQ5NE16 218 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 RABGAP1LQ5R372 815 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 LIPKQ5VXJ0 399 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 FAM159AQ6UWV7 190 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 TSEN54Q7Z6J9 526 aaKnown RBP3.65□□□□□ -1.83
NUP88-213ENST00000576862 GPBP1Q86WP2 473 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 ZNF677Q86XU0 584 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 PLCZ1Q86YW0 608 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 CCDC50Q8IVM0 306 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 CEND1Q8N111 149 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 C17orf78Q8N4C9 275 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 CEP112Q8N8E3 955 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 OR8J2Q8NGG1 315 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 KCNG3Q8TAE7 436 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 FANK1Q8TC84 345 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 DNAJC19Q96DA6 116 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 C4orf36Q96KX1 117 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 TAAR1Q96RJ0 339 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 TGS1Q96RS0 853 aaKnown RBP3.65□□□□□ -1.83
NUP88-213ENST00000576862 RAB34Q9BZG1 259 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 DERL2Q9GZP9 239 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 MAGT1Q9H0U3 335 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 OPN3Q9H1Y3 402 aaPredicted RBP3.65□□□□□ -1.83
NUP88-213ENST00000576862 SAV1Q9H4B6 383 aaPredicted RBP3.65□□□□□ -1.83
NUP88-213ENST00000576862 METTL8Q9H825 291 aaKnown RBP3.65□□□□□ -1.83
NUP88-213ENST00000576862 ZNF160Q9HCG1 818 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 MRPS30Q9NP92 439 aaKnown RBP3.65□□□□□ -1.83
NUP88-213ENST00000576862 PAQR5Q9NXK6 330 aaPredicted RBP3.65□□□□□ -1.83
NUP88-213ENST00000576862 TMEM9Q9P0T7 183 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 WRAP73Q9P2S5 460 aaPredicted RBP3.65□□□□□ -1.83
NUP88-213ENST00000576862 ONECUT1Q9UBC0 465 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 SLC2A6Q9UGQ3 507 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 APOBEC3BQ9UH17 382 aaKnown RBP3.65□□□□□ -1.83
NUP88-213ENST00000576862 RWDD2AQ9UIY3 292 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 UBIAD1Q9Y5Z9 338 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 ECM29Q5VYK3 1845 aa3.65□□□□□ -1.83
NUP88-213ENST00000576862 CCDC88AQ3V6T2 1871 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 TRAV26-1A0A087WT03 109 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 LRIT2A6NDA9 550 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 OR2AG2A6NM03 316 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 ZFP92A6NM28 416 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 TRPC5OSA6NMA1 111 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 C9JVG2 144 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 ITGB1BP1O14713 200 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 KDELR3O43731 214 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 STX11O75558 287 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 UPK3AO75631 287 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 CNMDO75829 334 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 CCNE2O96020 404 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 CRYGBP07316 175 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 GSTA1P08263 222 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 ANXA4P09525 319 aaPredicted RBP3.64□□□□□ -1.83
NUP88-213ENST00000576862 IDO1P14902 403 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 TCN1P20061 433 aaPredicted RBP3.64□□□□□ -1.83
NUP88-213ENST00000576862 TUBG1P23258 451 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 CCNE1P24864 410 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 PRDX6P30041 224 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 LCN1P31025 176 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 PPP1R2P41236 205 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 RGS8P57771 180 aaPredicted RBP3.64□□□□□ -1.83
NUP88-213ENST00000576862 GPX6P59796 221 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 PRPS1P60891 318 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 SERTAD2Q14140 314 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 RCAN2Q14206 197 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 SELPLGQ14242 412 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 XKR7Q5GH72 579 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 BEX5Q5H9J7 111 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 ATF7IP2Q5U623 682 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 PPP1R2P3Q6NXS1 205 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 TMIGD1Q6UXZ0 262 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 TMEM26Q6ZUK4 368 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 NDUFAF7Q7L592 441 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 NIPA1Q7RTP0 329 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 SSX9Q7RTT3 188 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 ADGRD2Q7Z7M1 963 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 VRK2Q86Y07 508 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms