RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 RGS8P57771 180 aaPredicted RBP9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 DEFA6Q01524 100 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 PLP2Q04941 152 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 BST1Q10588 318 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 SLC36A2Q495M3 483 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 GTDC1Q4AE62 458 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 FAM209AQ5JX71 171 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 SWT1Q5T5J6 900 aaKnown RBP9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 NXNQ6DKJ4 435 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 ICA1LQ8NDH6 482 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 CPEB3Q8NE35 698 aaKnown RBP9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 ST7LQ8TDW4 575 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 ELMOD3Q96FG2 381 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 MOGAT1Q96PD6 335 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 TSPAN32Q96QS1 320 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 TMEM43Q9BTV4 400 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 RNF121Q9H920 327 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 TCF7L2Q9NQB0 619 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 GLTPQ9NZD2 209 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 ZIM2Q9NZV7 527 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 SLC13A4Q9UKG4 626 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 WNK2Q9Y3S1 2297 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 A0A0B4J2E0 115 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 IQCMA0A1B0GVH7 501 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 A0A1B0GX12 115 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 PLSCR5A0PG75 271 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 ISPDA4D126 451 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 CLIC1O00299 241 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 RGS16O15492 202 aaPredicted RBP9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 CCL2P13500 99 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 ZNF81P51508 661 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 UCP2P55851 309 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 LCN2P80188 198 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 SLC3A1Q07837 685 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 TSTQ16762 297 aaKnown RBP9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 KRT71Q3SY84 523 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 ARMCX4Q5H9R4 360 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 DHRS4L2Q6PKH6 230 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 NHLRC1Q6VVB1 395 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 RANBP3LQ86VV4 465 aaPredicted RBP9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 WDFY1Q8IWB7 410 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 PAQR4Q8N4S7 273 aaPredicted RBP9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 LRRC17Q8N6Y2 441 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 SIGLECL1Q8N7X8 197 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 BHLHE22Q8NFJ8 381 aaPredicted RBP9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 OR5J2Q8NH18 312 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 OR6X1Q8NH79 312 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 FGFBP3Q8TAT2 258 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 CCL17Q92583 94 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 DVL3Q92997 716 aaPredicted RBP9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 TMEM54Q969K7 222 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 ZNF566Q969W8 418 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 GPA33Q99795 319 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 SH3GL3Q99963 347 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 TMEM109Q9BVC6 243 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 SDR39U1Q9NRG7 319 aaPredicted RBP9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 TMEM38BQ9NVV0 291 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 OPN4Q9UHM6 478 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 CACNG2Q9Y698 323 aa9.9□□□□□ -0.82
CTDNEP1-212ENST00000576613 TRRAPQ9Y4A5 3859 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 PPIAL4EA0A075B759 164 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 PPIAL4CA0A0B4J2A2 164 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 PRORSD1PA6NEY8 169 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 DNAJC9-AS1A6NH13 148 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 LRRN3E7EW58 273 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 C11orf98E9PRG8 122 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 PPIAL4DF5H284 164 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 FOXH1O75593 365 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 IGHV3-13P01766 116 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 PPIAL4FP0DN26 164 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 ARAFP10398 606 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 APLNRP35414 380 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 ATP4BP51164 291 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 POLR2JP52435 117 aaKnown RBP9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 ERVS71-1P61550 626 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 IL13RA1P78552 427 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 GLO1Q04760 184 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 OR1Q1Q15612 314 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 NRN1LQ496H8 165 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 CEP85LQ5SZL2 805 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 GCNT6Q5T4J0 391 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 REEP3Q6NUK4 255 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 UNQ6126/PRO20091Q6UXV3 157 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 WDR88Q6ZMY6 472 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 SLC35D2Q76EJ3 337 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 DOK3Q7L591 496 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 SLC16A14Q7RTX9 510 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 COMTD1Q86VU5 262 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 GOLGA6L1Q8N7Z2 621 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 OR4K5Q8NGD3 323 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 OR1J1Q8NGS3 322 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 NFKBIDQ8NI38 313 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 POP5Q969H6 163 aaKnown RBP9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 SLC25A28Q96A46 364 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 TRIM44Q96DX7 344 aaPredicted RBP9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 SLC25A44Q96H78 314 aaPredicted RBP9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 PAIP2Q9BPZ3 127 aaKnown RBP9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 EGLN1Q9GZT9 426 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 EVA1AQ9H8M9 152 aa9.89□□□□□ -0.83
CTDNEP1-212ENST00000576613 UNKLQ9H9P5 680 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms