RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 TRIP10Q15642 601 aa12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 PHYHD1Q5SRE7 291 aa12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 SLC35F1Q5T1Q4 408 aa12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 KDM4DQ6B0I6 523 aa12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 OR7E24Q6IFN5 339 aa12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 SLC27A4Q6P1M0 643 aa12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 MEX3BQ6ZN04 569 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 ADCK1Q86TW2 530 aa12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 WDFY1Q8IWB7 410 aa12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 PARP8Q8N3A8 854 aa12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 CBR4Q8N4T8 237 aa12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 ZNF433Q8N7K0 673 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 OR4K13Q8NH42 304 aa12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 KCNK17Q96T54 332 aa12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 MRPL13Q9BYD1 178 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 NPDC1Q9NQX5 325 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-218ENST00000574964 GCN1Q92616 2671 aaKnown RBP12.77□□□□□ -0.36
NPLOC4-218ENST00000574964 PRSS37A4D1T9 235 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 TUBAL3A6NHL2 446 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 RPL36A-HNRNPH2H7BZ11 118 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 DHHO43323 396 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 AHCYL1O43865 530 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 MITFO75030 526 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 TXNDC12O95881 172 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 IFNGP01579 166 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 ITGA5P08648 1049 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 PPP3CBP16298 524 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 CRISP1P54107 249 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 RAD23AP54725 363 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 SH3BGRP55822 239 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 ESRRGP62508 458 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 ARF1P84077 181 aaKnown RBP12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 PPP2R2BQ00005 443 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 STK11Q15831 433 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 PGGHGQ32M88 737 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 MESTQ5EB52 335 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 THEM4Q5T1C6 240 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 SP5Q6BEB4 398 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 LEG1Q6P5S2 330 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 KLHL24Q6TFL4 600 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 LINGO2Q7L985 606 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 LNX2Q8N448 690 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 IQCF1Q8N6M8 205 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 OR52E2Q8NGJ4 325 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 OR4Q3Q8NH05 313 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 NSMAFQ92636 917 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 MCHR2Q969V1 340 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 USB1Q9BQ65 265 aaKnown RBP12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 MED18Q9BUE0 208 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 ACTR6Q9GZN1 396 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 RIBC2Q9H4K1 309 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 RERGLQ9H628 205 aa12.77□□□□□ -0.37
NPLOC4-218ENST00000574964 SLC22A23A1A5C7 686 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 ZNF99A8MXY4 864 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 BHLHE40O14503 412 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 CASKO14936 926 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 HMGN1P05114 100 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 HIST1H1CP16403 213 aaKnown RBP12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 GRK5P34947 590 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 GUCA1AP43080 201 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 KIR2DL3P43628 341 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 GIPRP48546 466 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 ALDH3A2P51648 485 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 FMODQ06828 376 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 LRRC36Q1X8D7 754 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 ALKBH2Q6NS38 261 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 LRFN4Q6PJG9 635 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 DNM1P34Q6PK57 102 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 C1orf162Q8NEQ5 155 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 SDR9C7Q8NEX9 313 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 OR1K1Q8NGR3 316 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 LINC01560Q8TB33 94 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 S100PBPQ96BU1 408 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 MUCL1Q96DR8 90 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 ZC3HAV1LQ96H79 300 aaKnown RBP12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 PLEKHA8Q96JA3 519 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 NMNAT3Q96T66 252 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 OR10A4Q9H209 315 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 SLC24A3Q9HC58 644 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 USE1Q9NZ43 259 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 PLEKHB1Q9UF11 243 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 KLHL21Q9UJP4 597 aa12.76□□□□□ -0.37
NPLOC4-218ENST00000574964 A0A096LPE4 126 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 A0A1W2PPZ6 126 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 RIIAD1A6NNX1 92 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 SLC16A7O60669 478 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 SEC14L2O76054 403 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 SLC2A10O95528 541 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 ALPLP05186 524 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 COX6B1P14854 86 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 CDKN2AP42771 156 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 CENPAP49450 140 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 UBE2NP61088 152 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 PTGES3Q15185 160 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 GABRA6Q16445 453 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 HIST3H3Q16695 136 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 LPCAT4Q643R3 524 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 ANKRD16Q6P6B7 361 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 ZNF813Q6ZN06 617 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms