RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 BAP18Q8IXM2 172 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 BPIFB2Q8N4F0 458 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 OR4K17Q8NGC6 315 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 OR9A2Q8NGT5 310 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 MOAP1Q96BY2 351 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 MEGF10Q96KG7 1140 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 NKX3-1Q99801 234 aaPredicted RBP8.75□□□□□ -1.01
CCDC40-212ENST00000574799 POLE3Q9NRF9 147 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 IDSB3KWA1 339 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 STMND1H3BQB6 276 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 H7C1Q1 480 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 EMC8O43402 210 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 IFNA17P01571 189 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 SFTA3P0C7M3 94 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 ZNF28P17035 718 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 CASRP41180 1078 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 NDUFA6P56556 154 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 CXADRP78310 365 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 EIPR1Q53HC9 387 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 PWWP2BQ6NUJ5 590 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 ZNF529Q6P280 563 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 TRAM1L1Q8N609 369 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 ZNF565Q8N9K5 539 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 RHOVQ96L33 236 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 PGLYRP3Q96LB9 341 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 PHB2Q99623 299 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 PARP12Q9H0J9 701 aaKnown RBP8.75□□□□□ -1.01
CCDC40-212ENST00000574799 CMC2Q9NRP2 79 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 hCG_1809904A0A1W2PP81 198 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 A0A1W2PR64 198 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 A0A1W2PRV1 198 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 A6NLC8 198 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 DUXAA6NLW8 204 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 ZNF736B4DX44 427 aaPredicted RBP8.75□□□□□ -1.01
CCDC40-212ENST00000574799 CDC40O60508 579 aaKnown RBP eCLIP8.75□□□□□ -1.01
CCDC40-212ENST00000574799 ACTL6AO96019 429 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 PRH1P02810 166 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 TACSTD2P09758 323 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 OR8G3PP0DMU2 310 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 ADH5P11766 374 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 DAOP14920 347 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 PSMB5P28074 263 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 PRLHRP49683 370 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 EFNB1P98172 346 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 ZNF616Q08AN1 781 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 TGIF1Q15583 401 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 FAM199XQ6PEV8 388 aaPredicted RBP8.75□□□□□ -1.01
CCDC40-212ENST00000574799 RFLNBQ8N5W9 214 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 OR7G2Q8NG99 324 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 OR10H5Q8NGA6 315 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 OR6N1Q8NGY5 312 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 OR5AK2Q8NH90 309 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 MIB2Q96AX9 1013 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 SLC25A38Q96DW6 304 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 AKR1E2Q96JD6 320 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 TNFRSF13CQ96RJ3 184 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 SELENOIQ9C0D9 397 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 WDR13Q9H1Z4 485 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 FN3KRPQ9HA64 309 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 ZMIZ1Q9ULJ6 1067 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 ZNF337Q9Y3M9 751 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 IER3IP1Q9Y5U9 82 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 ALPK2Q86TB3 2170 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 ATG2BQ96BY7 2078 aa8.75□□□□□ -1.01
CCDC40-212ENST00000574799 CEP290O15078 2479 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 ST8SIA5O15466 376 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 GPRIN2O60269 458 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 GLP1RP43220 463 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 PDX1P52945 283 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 ILF3Q12906 894 aaKnown RBP eCLIP8.74□□□□□ -1.01
CCDC40-212ENST00000574799 KIAA0141Q14154 515 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-212ENST00000574799 GAS6Q14393 721 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 MPPED2Q15777 294 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 RNASE10Q5GAN6 216 aaKnown RBP8.74□□□□□ -1.01
CCDC40-212ENST00000574799 RPL13AP3Q6NVV1 102 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 LCTLQ6UWM7 567 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 VITQ6UXI7 678 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 THSD4Q6ZMP0 1018 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 ZNF584Q8IVC4 421 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 OR5AR1Q8NGP9 310 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 TFGQ92734 400 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-212ENST00000574799 S100A13Q99584 98 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 LMAN2LQ9H0V9 348 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 TMPRSS5Q9H3S3 457 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 ADGRL4Q9HBW9 690 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 LRRC72A6NJI9 287 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 H7C417 338 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 KLK3P07288 261 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-212ENST00000574799 OR2T7P0C7T2 308 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 C6P13671 934 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 MAOAP21397 527 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 AVPR2P30518 371 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 DRD3P35462 400 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 TAS2R19P59542 299 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 SRSF3P84103 164 aaKnown RBP8.74□□□□□ -1.01
CCDC40-212ENST00000574799 PJVKQ0ZLH3 352 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 SKP2Q13309 424 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 ALKBH1Q13686 389 aaKnown RBP8.74□□□□□ -1.01
CCDC40-212ENST00000574799 OR4C11Q6IEV9 310 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 ARHGAP11AQ6P4F7 1023 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms