RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 TMEM38BQ9NVV0 291 aa13.05□□□□□ -0.32
CTNS-209ENST00000574776 SLC7A8Q9UHI5 535 aa13.05□□□□□ -0.32
CTNS-209ENST00000574776 A0A1W2PPW3 197 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 TRAPPC13A5PLN9 417 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 FAM157AC9JC47 383 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 BLOC1S5-TXNDC5H3BN57 136 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 ANGPT2O15123 496 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 BCL10O95999 233 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 CLPTM1O96005 669 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 CD247P20963 164 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 ACHEP22303 614 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 TMEM33P57088 247 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 REP15Q6BDI9 236 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 PATL1Q86TB9 770 aaKnown RBP13.04□□□□□ -0.32
CTNS-209ENST00000574776 PAQR4Q8N4S7 273 aaPredicted RBP13.04□□□□□ -0.32
CTNS-209ENST00000574776 SLC30A7Q8NEW0 376 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 OR4K5Q8NGD3 323 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 SLC26A7Q8TE54 656 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 TAMM41Q96BW9 452 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 RACGAP1Q9H0H5 632 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 OR51B6Q9H340 312 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 KAT8Q9H7Z6 458 aaKnown RBP13.04□□□□□ -0.32
CTNS-209ENST00000574776 LPAR2Q9HBW0 351 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 ZNF275Q9NSD4 429 aaPredicted RBP13.04□□□□□ -0.32
CTNS-209ENST00000574776 TREM2Q9NZC2 230 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 TAAR3PQ9P1P4 343 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 METRNQ9UJH8 293 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 ZNF229Q9UJW7 825 aa13.04□□□□□ -0.32
CTNS-209ENST00000574776 PPIHO43447 177 aaKnown RBP13.03□□□□□ -0.32
CTNS-209ENST00000574776 NCR1O76036 304 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 FARS2O95363 451 aaKnown RBP13.03□□□□□ -0.32
CTNS-209ENST00000574776 ASAH2BP0C7U1 165 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 PGA4P0DJD7 388 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 PGA3P0DJD8 388 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 SAGP10523 405 aaPredicted RBP13.03□□□□□ -0.32
CTNS-209ENST00000574776 UMPSP11172 480 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 ITGA2P17301 1181 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 MAGEB1P43366 347 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 MYBPC1Q00872 1141 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 RUNX1T1Q06455 604 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 NFYCQ13952 458 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 NKPD1Q17RQ9 610 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 TTMPQ5BVD1 217 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 RGS7BPQ6MZT1 257 aaPredicted RBP13.03□□□□□ -0.32
CTNS-209ENST00000574776 TMEM53Q6P2H8 277 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 GLCCI1Q86VQ1 547 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 OR10A6Q8NH74 314 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 MCHR2Q969V1 340 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 MPP4Q96JB8 637 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 PRSS27Q9BQR3 290 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 OCEL1Q9H607 264 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 CDH20Q9HBT6 801 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 MEPEQ9NQ76 525 aaPredicted RBP13.03□□□□□ -0.32
CTNS-209ENST00000574776 HIF1ANQ9NWT6 349 aa13.03□□□□□ -0.32
CTNS-209ENST00000574776 ZNF346Q9UL40 294 aaKnown RBP13.03□□□□□ -0.32
CTNS-209ENST00000574776 SLC22A23A1A5C7 686 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 CDC14BO60729 498 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 ENTPD5O75356 428 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 F13BP05160 661 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 LCKP06239 509 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 PCMT1P22061 227 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 CLRN1P58418 232 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 SELENOVP59797 346 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 ERVS71-1P61550 626 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 HIST3H3Q16695 136 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 SLC16A14Q7RTX9 510 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 SLC30A8Q8IWU4 369 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 SYT14Q8NB59 555 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 SYNPRQ8TBG9 265 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 TMEM186Q96B77 213 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 TSPAN32Q96QS1 320 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 ZNF347Q96SE7 839 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 ZNF426Q9BUY5 554 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 SLC19A3Q9BZV2 496 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 PCDHAC1Q9H158 963 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 ZNF385DQ9H6B1 395 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 METTL17Q9H7H0 456 aaPredicted RBP13.02□□□□□ -0.33
CTNS-209ENST00000574776 HINT3Q9NQE9 182 aaKnown RBP13.02□□□□□ -0.33
CTNS-209ENST00000574776 INTS9Q9NV88 658 aaKnown RBP13.02□□□□□ -0.33
CTNS-209ENST00000574776 ANK2Q01484 3957 aa13.02□□□□□ -0.33
CTNS-209ENST00000574776 C17orf100A8MU93 164 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 RP2O75695 350 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 IGHG1P01857 330 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 GAAP10253 952 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 FUT1P19526 365 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 PCGF2P35227 344 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 GZMMP51124 257 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 CRYBA2P53672 197 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 UCP2P55851 309 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 LMO4P61968 165 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 CCL8P80075 99 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 MRPS11P82912 194 aaKnown RBP13.01□□□□□ -0.33
CTNS-209ENST00000574776 VMACQ2NL98 169 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 SLC36A2Q495M3 483 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 INTS11Q5TA45 600 aaKnown RBP13.01□□□□□ -0.33
CTNS-209ENST00000574776 TMEM154Q6P9G4 183 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 NANOGNBQ7Z5D8 188 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 DPPA2Q7Z7J5 298 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 LRRC18Q8N456 261 aa13.01□□□□□ -0.33
CTNS-209ENST00000574776 TSPEARQ8WU66 669 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms