RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 GINS1Q14691 196 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 DUX4L9Q6RFH8 374 aaPredicted RBP2.36□□□□□ -2.03
CDC27-216ENST00000574304 Q6ZPB1 254 aaPredicted RBP2.36□□□□□ -2.03
CDC27-216ENST00000574304 NTM-AS1Q6ZSK4 140 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 TMEM179Q6ZVK1 233 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 ABHD13Q7L211 337 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 WDR86Q86TI4 376 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 PUSL1Q8N0Z8 303 aaKnown RBP2.36□□□□□ -2.03
CDC27-216ENST00000574304 COQ2Q96H96 371 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 RPRD1AQ96P16 312 aaPredicted RBP2.36□□□□□ -2.03
CDC27-216ENST00000574304 COPS8Q99627 209 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 RARRES2Q99969 163 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 MRPL37Q9BZE1 423 aaKnown RBP2.36□□□□□ -2.03
CDC27-216ENST00000574304 PPA2Q9H2U2 334 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 HMG20AQ9NP66 347 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 ISYNA1Q9NPH2 558 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 PTBP2Q9UKA9 531 aaKnown RBP2.36□□□□□ -2.03
CDC27-216ENST00000574304 KIAA1257Q9ULG3 409 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 SNX6Q9UNH7 406 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 MRPS7Q9Y2R9 242 aaKnown RBP2.36□□□□□ -2.03
CDC27-216ENST00000574304 AP1M2Q9Y6Q5 423 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 ATP10AO60312 1499 aa2.36□□□□□ -2.03
CDC27-216ENST00000574304 ZNF726A6NNF4 738 aa2.35□□□□□ -2.03
CDC27-216ENST00000574304 FABP3P05413 133 aa2.35□□□□□ -2.03
CDC27-216ENST00000574304 HSD17B2P37059 387 aa2.35□□□□□ -2.03
CDC27-216ENST00000574304 CCT3P49368 545 aaKnown RBP2.35□□□□□ -2.03
CDC27-216ENST00000574304 UGT2B15P54855 530 aa2.35□□□□□ -2.03
CDC27-216ENST00000574304 SF3A2Q15428 464 aaKnown RBP2.35□□□□□ -2.03
CDC27-216ENST00000574304 KCTD21Q4G0X4 260 aa2.35□□□□□ -2.03
CDC27-216ENST00000574304 DHDDSQ86SQ9 333 aa2.35□□□□□ -2.03
CDC27-216ENST00000574304 MMAAQ8IVH4 418 aaKnown RBP2.35□□□□□ -2.03
CDC27-216ENST00000574304 CEP112Q8N8E3 955 aa2.35□□□□□ -2.03
CDC27-216ENST00000574304 OR5D13Q8NGL4 314 aa2.35□□□□□ -2.03
CDC27-216ENST00000574304 FAM110BQ8TC76 370 aa2.35□□□□□ -2.03
CDC27-216ENST00000574304 RBMXL1Q96E39 390 aaKnown RBP2.35□□□□□ -2.03
CDC27-216ENST00000574304 HSFY1Q96LI6 401 aa2.35□□□□□ -2.03
CDC27-216ENST00000574304 FOXC2Q99958 501 aa2.35□□□□□ -2.03
CDC27-216ENST00000574304 SH3GL3Q99963 347 aa2.35□□□□□ -2.03
CDC27-216ENST00000574304 KCTD14Q9BQ13 255 aaPredicted RBP2.35□□□□□ -2.03
CDC27-216ENST00000574304 NIPAL2Q9H841 368 aa2.35□□□□□ -2.03
CDC27-216ENST00000574304 CGNQ9P2M7 1197 aaKnown RBP2.35□□□□□ -2.03
CDC27-216ENST00000574304 PSG8Q9UQ74 426 aa2.35□□□□□ -2.03
CDC27-216ENST00000574304 GPATCH8Q9UKJ3 1502 aaKnown RBP2.35□□□□□ -2.03
CDC27-216ENST00000574304 IGLV3-12A0A075B6K2 115 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 A0A0B4J2A0 478 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 TMEM223A0PJW6 202 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 RAD51BO15315 384 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 DBTP11182 482 aaKnown RBP2.34□□□□□ -2.03
CDC27-216ENST00000574304 ATP5C1P36542 298 aaKnown RBP2.34□□□□□ -2.03
CDC27-216ENST00000574304 YAP1P46937 504 aaKnown RBP2.34□□□□□ -2.03
CDC27-216ENST00000574304 CSNK1A1P48729 337 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 IRX3P78415 501 aaPredicted RBP2.34□□□□□ -2.03
CDC27-216ENST00000574304 FGL1Q08830 312 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 ARHGAP19Q14CB8 494 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 SLC25A24Q6NUK1 477 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 BHLHA15Q7RTS1 189 aaPredicted RBP2.34□□□□□ -2.03
CDC27-216ENST00000574304 OR2G2Q8NGZ5 317 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 OR4S2Q8NH73 311 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 SYAP1Q96A49 352 aaPredicted RBP2.34□□□□□ -2.03
CDC27-216ENST00000574304 TM4SF18Q96CE8 201 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 C10orf35Q96D05 121 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 MFFQ9GZY8 342 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 GPATCH2LQ9NWQ4 482 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 SHPKQ9UHJ6 478 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 ADAM28Q9UKQ2 775 aa2.34□□□□□ -2.03
CDC27-216ENST00000574304 CDHR2Q9BYE9 1310 aa2.34□□□□□ -2.04
CDC27-216ENST00000574304 TRAV26-1A0A087WT03 109 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 TRAV39A0A0B4J263 110 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 HIDE1A8MVS5 230 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 GOLGA8SH3BPF8 625 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 SGK1O00141 431 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 BCHEP06276 602 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 IGKV4-1P06312 121 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 CD1CP29017 333 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 RORCP51449 518 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 ARG2P78540 354 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 OGDHQ02218 1023 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 ZNF92Q03936 586 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 LOXL1Q08397 574 aaPredicted RBP2.33□□□□□ -2.04
CDC27-216ENST00000574304 MRPL28Q13084 256 aaKnown RBP2.33□□□□□ -2.04
CDC27-216ENST00000574304 EXOC3L2Q2M3D2 409 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 CCDC92Q53HC0 331 aaPredicted RBP2.33□□□□□ -2.04
CDC27-216ENST00000574304 LHFPL3Q86UP9 236 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 LGI3Q8N145 548 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 OSR2Q8N2R0 312 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 TRPV1Q8NER1 839 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 SCFD1Q8WVM8 642 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 TMEM54Q969K7 222 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 RNF157Q96PX1 679 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 PANX2Q96RD6 677 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 AZI2Q9H6S1 392 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 EPS15L1Q9UBC2 864 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 CDH9Q9ULB4 789 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 GPR179Q6PRD1 2367 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 BRWD3Q6RI45 1802 aa2.33□□□□□ -2.04
CDC27-216ENST00000574304 NUP214P35658 2090 aaPredicted RBP2.32□□□□□ -2.04
CDC27-216ENST00000574304 IGLV1-50A0A075B6I6 118 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 ZNF233A6NK53 670 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 CCL21O00585 134 aa2.32□□□□□ -2.04
CDC27-216ENST00000574304 MAGEB3O15480 346 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms