RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 WDR55Q9H6Y2 383 aaPredicted RBP16.84■□□□□ 0.29
CCDC40-206ENST00000572083 RNF121Q9H920 327 aa16.84■□□□□ 0.29
CCDC40-206ENST00000572083 ZMAT3Q9HA38 289 aaKnown RBP16.84■□□□□ 0.29
CCDC40-206ENST00000572083 BCL2L10Q9HD36 194 aa16.84■□□□□ 0.29
CCDC40-206ENST00000572083 ZNF69Q9UC07 566 aa16.84■□□□□ 0.29
CCDC40-206ENST00000572083 BIRC5O15392 142 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 IL6P05231 212 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 DRD4P21917 467 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 NCALDP61601 193 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 TBC1D28Q2M2D7 210 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 TUSC1Q2TAM9 212 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 PDCD4Q53EL6 469 aaKnown RBP16.83■□□□□ 0.28
CCDC40-206ENST00000572083 C6orf10Q5SRN2 563 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 FAM91A1Q658Y4 838 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 TMEM53Q6P2H8 277 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 PXKQ7Z7A4 578 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 ST7LQ8TDW4 575 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 TMEM54Q969K7 222 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 ELMOD3Q96FG2 381 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 SLC47A1Q96FL8 570 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 ZNF48Q96MX3 618 aaPredicted RBP16.83■□□□□ 0.28
CCDC40-206ENST00000572083 A4GALTQ9NPC4 353 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 TCF7L2Q9NQB0 619 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 TMEM38BQ9NVV0 291 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 GLTPQ9NZD2 209 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 SELENONQ9NZV5 590 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 NUP50Q9UKX7 468 aa16.83■□□□□ 0.28
CCDC40-206ENST00000572083 NOTCH1P46531 2555 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 C5orf58C9J3I9 102 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 SPRY3O43610 288 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 SNAP29O95721 258 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 MT-ND5P03915 603 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 ADORA3P0DMS8 318 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 PRKAR1BP31321 381 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 ZNF81P51508 661 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 UCP2P55851 309 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 IL13RA1P78552 427 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 RGNQ15493 299 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 KIRREL3Q8IZU9 778 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 OR4K5Q8NGD3 323 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 POP5Q969H6 163 aaKnown RBP16.82■□□□□ 0.28
CCDC40-206ENST00000572083 BCL2L14Q9BZR8 327 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 ROPN1BQ9BZX4 212 aaPredicted RBP16.82■□□□□ 0.28
CCDC40-206ENST00000572083 C1orf198Q9H425 327 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 ROPN1Q9HAT0 212 aaPredicted RBP16.82■□□□□ 0.28
CCDC40-206ENST00000572083 MMP26Q9NRE1 261 aa16.82■□□□□ 0.28
CCDC40-206ENST00000572083 LEF1Q9UJU2 399 aaPredicted RBP16.82■□□□□ 0.28
CCDC40-206ENST00000572083 A0A0B4J2E0 115 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 A0A1B0GX12 115 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 TPST1O60507 370 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 SLC22A3O75751 556 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 FARS2O95363 451 aaKnown RBP16.81■□□□□ 0.28
CCDC40-206ENST00000572083 IGHV1-46P01743 117 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 RNASE1P07998 156 aaKnown RBP16.81■□□□□ 0.28
CCDC40-206ENST00000572083 ATP4BP51164 291 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 STX3Q13277 289 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 MELKQ14680 651 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 OR1Q1Q15612 314 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 KLF17Q5JT82 389 aaPredicted RBP16.81■□□□□ 0.28
CCDC40-206ENST00000572083 FAM209AQ5JX71 171 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 SPATA46Q5T0L3 261 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 OR1J1Q8NGS3 322 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 OR5J2Q8NH18 312 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 SLC25A28Q96A46 364 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 ITCHQ96J02 903 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 RMND5AQ9H871 391 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 PLEK2Q9NYT0 353 aa16.81■□□□□ 0.28
CCDC40-206ENST00000572083 TESQ9UGI8 421 aaKnown RBP16.81■□□□□ 0.28
CCDC40-206ENST00000572083 PURGQ9UJV8 347 aaKnown RBP16.81■□□□□ 0.28
CCDC40-206ENST00000572083 ENTPD5O75356 428 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 UBOX5O94941 541 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 IGHV3-13P01766 116 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 ETS2P15036 469 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 MDKP21741 143 aaPredicted RBP16.8■□□□□ 0.28
CCDC40-206ENST00000572083 RGS8P57771 180 aaPredicted RBP16.8■□□□□ 0.28
CCDC40-206ENST00000572083 BST1Q10588 318 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 MOGQ16653 247 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 SLC36A2Q495M3 483 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 TMEM255AQ5JRV8 349 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 NXNQ6DKJ4 435 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 LEG1Q6P5S2 330 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 LRFN4Q6PJG9 635 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 SLC35D2Q76EJ3 337 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 SLC16A14Q7RTX9 510 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 OR6X1Q8NH79 312 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 NFKBIDQ8NI38 313 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCDC40-206ENST00000572083 ZNF566Q969W8 418 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 TRIM44Q96DX7 344 aaPredicted RBP16.8■□□□□ 0.28
CCDC40-206ENST00000572083 GPA33Q99795 319 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 WFDC6Q9BQY6 131 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 TMEM27Q9HBJ8 222 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 AUP1Q9Y679 476 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 TANC2Q9HCD6 1990 aa16.8■□□□□ 0.28
CCDC40-206ENST00000572083 IQCMA0A1B0GVH7 501 aa16.79■□□□□ 0.28
CCDC40-206ENST00000572083 POM121CA8CG34 1229 aa16.79■□□□□ 0.28
CCDC40-206ENST00000572083 DHHO43323 396 aa16.79■□□□□ 0.28
CCDC40-206ENST00000572083 FOXH1O75593 365 aa16.79■□□□□ 0.28
CCDC40-206ENST00000572083 MFN2O95140 757 aa16.79■□□□□ 0.28
CCDC40-206ENST00000572083 IDO1P14902 403 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms