RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 OR52D1Q9H346 318 aa6.1□□□□□ -1.43
SMG6-209ENST00000571442 EGLN3Q9H6Z9 239 aa6.1□□□□□ -1.43
SMG6-209ENST00000571442 CCM2LQ9NUG4 571 aaPredicted RBP6.1□□□□□ -1.43
SMG6-209ENST00000571442 ZNF226Q9NYT6 803 aa6.1□□□□□ -1.43
SMG6-209ENST00000571442 TMEM5Q9Y2B1 443 aa6.1□□□□□ -1.43
SMG6-209ENST00000571442 SAMHD1Q9Y3Z3 626 aaKnown RBP6.1□□□□□ -1.43
SMG6-209ENST00000571442 UGT2A1Q9Y4X1 527 aa6.1□□□□□ -1.43
SMG6-209ENST00000571442 DSCAMO60469 2012 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 ARPC4-TTLL3A0A0A6YYG9 625 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 IGHV1-18A0A0C4DH31 117 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 TEX13CA0A0J9YWL9 993 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 A0A1W2PRG6 482 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 NPIPB13A6NJU9 1138 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 ZNF99A8MXY4 864 aaPredicted RBP6.09□□□□□ -1.43
SMG6-209ENST00000571442 SHISA9B4DS77 424 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 NPIPB4C9JG80 1138 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 M0R1B8 84 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 DCTN6O00399 190 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 SOCS2O14508 198 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 CASKO14936 926 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 DHHO43323 396 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 AKAP8O43823 692 aaKnown RBP6.09□□□□□ -1.43
SMG6-209ENST00000571442 KRT36O76013 467 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 CCNB2O95067 398 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 NDUFB2O95178 105 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 SOX14O95416 240 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 GPANK1O95872 356 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 CST1P01037 141 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 IGHG1P01857 330 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 HLA-HP01893 362 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 PRKACGP22612 351 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 CALCRP30988 508 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 CDAP32320 146 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 CDKN2AP42771 156 aaKnown RBP6.09□□□□□ -1.43
SMG6-209ENST00000571442 SMIM11AP58511 58 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 TSPAN31Q12999 210 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 MICAQ29983 383 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 RFX4Q33E94 735 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 BEX5Q5H9J7 111 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 C1orf146Q5VVC0 180 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 ADAM5Q6NVV9 412 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 ANKRD16Q6P6B7 361 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 ZNF620Q6ZNG0 422 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 ZNF627Q7L945 461 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 RRM2BQ7LG56 351 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 MDP1Q86V88 176 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 SKA3Q8IX90 412 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 C17orf78Q8N4C9 275 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 ARIH2OSQ8N7S6 290 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 OR10G2Q8NGC3 310 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 OR4Q3Q8NH05 313 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 FANK1Q8TC84 345 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 GNPDA2Q8TDQ7 276 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 NSMAFQ92636 917 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 GTPBP3Q969Y2 492 aaKnown RBP6.09□□□□□ -1.43
SMG6-209ENST00000571442 NABP1Q96AH0 204 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 DUS3LQ96G46 650 aaKnown RBP6.09□□□□□ -1.43
SMG6-209ENST00000571442 SAMD8Q96LT4 415 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 ADAD1Q96M93 576 aaKnown RBP6.09□□□□□ -1.43
SMG6-209ENST00000571442 FOXN4Q96NZ1 517 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 GPX7Q96SL4 187 aaPredicted RBP6.09□□□□□ -1.43
SMG6-209ENST00000571442 FOXB1Q99853 325 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 SH3GL3Q99963 347 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 TRIM15Q9C019 465 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 REEP1Q9H902 201 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 NRIP3Q9NQ35 241 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 TMEM38BQ9NVV0 291 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 B3GNT2Q9NY97 397 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 PLEKHA6Q9Y2H5 1048 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 IER3IP1Q9Y5U9 82 aa6.09□□□□□ -1.43
SMG6-209ENST00000571442 ZNF469Q96JG9 3925 aaPredicted RBP6.09□□□□□ -1.43
SMG6-209ENST00000571442 ITPR3Q14573 2671 aa6.09□□□□□ -1.44
SMG6-209ENST00000571442 VPS13CQ709C8 3753 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 NAV3Q8IVL0 2385 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 PLCE1Q9P212 2302 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 SLC22A23A1A5C7 686 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 HTR3EA5X5Y0 456 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 OR6C65A6NJZ3 312 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 H3BNX3 289 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 EBAG9O00559 213 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 BHLHE40O14503 412 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 ABCD4O14678 606 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 ARHGEF9O43307 516 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 TXNDC12O95881 172 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 IGLV1-44P01699 117 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 CECR9P0C854 216 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 CTLA4P16410 223 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 CD40P25942 277 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 RPL4P36578 427 aaKnown RBP6.08□□□□□ -1.44
SMG6-209ENST00000571442 RASSF2P50749 326 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 DAP3P51398 398 aaKnown RBP6.08□□□□□ -1.44
SMG6-209ENST00000571442 CLRN1P58418 232 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 PRPS1P60891 318 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 PIGFQ07326 219 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 CD47Q08722 323 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 KRR1Q13601 381 aaKnown RBP6.08□□□□□ -1.44
SMG6-209ENST00000571442 KPNB1Q14974 876 aaKnown RBP6.08□□□□□ -1.44
SMG6-209ENST00000571442 CLEC12AQ5QGZ9 265 aa6.08□□□□□ -1.44
SMG6-209ENST00000571442 ZNF362Q5T0B9 420 aaPredicted RBP6.08□□□□□ -1.44
SMG6-209ENST00000571442 C10orf128Q5T292 105 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms