RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 NUS1Q96E22 293 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 SENP5Q96HI0 755 aaPredicted RBP3.22□□□□□ -1.89
SMG6-208ENST00000570874 HSPA12BQ96MM6 686 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 NOL4LQ96MY1 436 aaPredicted RBP3.22□□□□□ -1.89
SMG6-208ENST00000570874 FEVQ99581 238 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 COPS8Q99627 209 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 MYOCQ99972 504 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 AIF1LQ9BQI0 150 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 DPH7Q9BTV6 452 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 THTPAQ9BU02 230 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 RSG1Q9BU20 258 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 RBM24Q9BX46 236 aaKnown RBP3.22□□□□□ -1.89
SMG6-208ENST00000570874 MAP1LC3CQ9BXW4 147 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 HDAC8Q9BY41 377 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 YTHDF1Q9BYJ9 559 aaKnown RBP3.22□□□□□ -1.89
SMG6-208ENST00000570874 SPNS1Q9H2V7 528 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 PIGMQ9H3S5 423 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 ACTL8Q9H568 366 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 EGLN3Q9H6Z9 239 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 ZNF430Q9H8G1 570 aaPredicted RBP3.22□□□□□ -1.89
SMG6-208ENST00000570874 Q9N2J8 555 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 FZD3Q9NPG1 666 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 HEBP1Q9NRV9 189 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 THSD1Q9NS62 852 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 C2orf42Q9NWW7 574 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 DNAJB12Q9NXW2 375 aaKnown RBP3.22□□□□□ -1.89
SMG6-208ENST00000570874 NUDT4Q9NZJ9 180 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 JKAMPQ9P055 326 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 TMEM9Q9P0T7 183 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 IKZF2Q9UKS7 526 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 FBXL3Q9UKT7 428 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 NDRG2Q9UN36 371 aaKnown RBP3.22□□□□□ -1.89
SMG6-208ENST00000570874 SH2B3Q9UQQ2 575 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 PDE10AQ9Y233 779 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 NDUFAF1Q9Y375 327 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 PRELID3BQ9Y3B1 194 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 DNAJC15Q9Y5T4 150 aa3.22□□□□□ -1.89
SMG6-208ENST00000570874 ASXL3Q9C0F0 2248 aa3.21□□□□□ -1.89
SMG6-208ENST00000570874 COL5A1P20908 1838 aaPredicted RBP3.21□□□□□ -1.89
SMG6-208ENST00000570874 HEATR5AQ86XA9 2040 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 KCNE1BA0A087WTH5 132 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 PRAMEF33A0A0G2JMD5 474 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TEX13DA0A0J9YY54 714 aaPredicted RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 KBTBD11-OT1A0A1B0GTJ5 212 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 FAM90A10PA6NDY2 464 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 IGLON5A6NGN9 336 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 ZNF99A8MXY4 864 aaPredicted RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 LOC730098B7Z3J9 87 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 IFNL4K9M1U5 179 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 AZIN1O14977 448 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 YY2O15391 372 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 MBTPS2O43462 519 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 LATO43561 262 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SYNGR3O43761 229 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 PCDH7O60245 1069 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 RAMP3O60896 148 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 OR2J3O76001 311 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SCELO95171 688 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SYNGR4O95473 234 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 WDPCPO95876 746 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 RAF1P04049 648 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 FUCA1P04066 466 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 C8BP07358 591 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 HCKP08631 526 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 MPC1LP0DKB6 136 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SCGB1A1P11684 91 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 SRFP11831 508 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 RNH1P13489 461 aaKnown RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 GTF2F2P13984 249 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 HGFP14210 728 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 PRF1P14222 555 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 B4GALT1P15291 398 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 NCK1P16333 377 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 FAHP16930 419 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 ZNF12P17014 697 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 RAB3AP20336 220 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 PMCHP20382 165 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 IL12AP29459 219 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 CCKBRP32239 447 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 GDNFP39905 211 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 GRIA3P42263 894 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 NSG1P42857 185 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TNFRSF4P43489 277 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 GPR1P46091 355 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 YAP1P46937 504 aaKnown RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 ZFP36L2P47974 494 aaKnown RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 SLC6A8P48029 635 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 PRLHRP49683 370 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 MEOX2P50222 304 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TNFSF10P50591 281 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 NXPH1P58417 271 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 TAS2R50P59544 299 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 PLP1P60201 277 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 RAP2BP61225 183 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 LSM6P62312 80 aaKnown RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 POLR2LP62875 67 aaKnown RBP3.21□□□□□ -1.9
SMG6-208ENST00000570874 DLK1P80370 383 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 CTBSQ01459 385 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 AESQ08117 197 aa3.21□□□□□ -1.9
SMG6-208ENST00000570874 BNIP2Q12982 314 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms