RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 HIST1H1CP16403 213 aaKnown RBP20.72■□□□□ 0.91
RAB40C-212ENST00000569575 PAX7P23759 505 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 ASCL1P50553 236 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.72■□□□□ 0.91
RAB40C-212ENST00000569575 ZNF362Q5T0B9 420 aaPredicted RBP20.72■□□□□ 0.91
RAB40C-212ENST00000569575 C10orf128Q5T292 105 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 TSPO2Q5TGU0 170 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 FBXW10Q5XX13 1052 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 ACSM5Q6NUN0 579 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 CCDC71Q8IV32 467 aaPredicted RBP20.72■□□□□ 0.91
RAB40C-212ENST00000569575 OR52E2Q8NGJ4 325 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 OR8J1Q8NGP2 316 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 OR10A4Q9H209 315 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 KCNJ16Q9NPI9 418 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 SLC7A10Q9NS82 523 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 FKBP7Q9Y680 259 aa20.72■□□□□ 0.91
RAB40C-212ENST00000569575 DLGAP1O14490 977 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 MPGP29372 298 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 GGT2P36268 569 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 PEX19P40855 299 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 BLVRAP53004 296 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 SLC25A1P53007 311 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 SNAPC1Q16533 368 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 UBE2J2Q8N2K1 259 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 ZNF610Q8N9Z0 462 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 NPEPL1Q8NDH3 523 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 OR4K13Q8NH42 304 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 RASD2Q96D21 266 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 NMD3Q96D46 503 aaKnown RBP20.71■□□□□ 0.91
RAB40C-212ENST00000569575 DDOQ99489 341 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 APOL4Q9BPW4 351 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 ULBP2Q9BZM5 246 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 TAS2R16Q9NYV7 291 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 HSPE1-MOB4S4R3N1 261 aa20.71■□□□□ 0.91
RAB40C-212ENST00000569575 HOXB1P14653 301 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-212ENST00000569575 CDKN2AP42771 156 aaKnown RBP20.7■□□□□ 0.9
RAB40C-212ENST00000569575 GUCA1AP43080 201 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-212ENST00000569575 ZNF84P51523 738 aa20.7■□□□□ 0.9
RAB40C-212ENST00000569575 EFNB1P98172 346 aa20.7■□□□□ 0.9
RAB40C-212ENST00000569575 CD47Q08722 323 aa20.7■□□□□ 0.9
RAB40C-212ENST00000569575 ZIK1Q3SY52 487 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-212ENST00000569575 OR7E24Q6IFN5 339 aa20.7■□□□□ 0.9
RAB40C-212ENST00000569575 LEG1Q6P5S2 330 aa20.7■□□□□ 0.9
RAB40C-212ENST00000569575 ZNF627Q7L945 461 aa20.7■□□□□ 0.9
RAB40C-212ENST00000569575 GABRG1Q8N1C3 465 aa20.7■□□□□ 0.9
RAB40C-212ENST00000569575 SETD9Q8NE22 299 aa20.7■□□□□ 0.9
RAB40C-212ENST00000569575 C1orf162Q8NEQ5 155 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-212ENST00000569575 OR2T4Q8NH00 348 aa20.7■□□□□ 0.9
RAB40C-212ENST00000569575 MCHR2Q969V1 340 aa20.7■□□□□ 0.9
RAB40C-212ENST00000569575 MBOAT4Q96T53 435 aa20.7■□□□□ 0.9
RAB40C-212ENST00000569575 TVP23BQ9NYZ1 205 aa20.7■□□□□ 0.9
RAB40C-212ENST00000569575 GMPPBQ9Y5P6 360 aa20.7■□□□□ 0.9
RAB40C-212ENST00000569575 SPENQ96T58 3664 aaKnown RBP20.69■□□□□ 0.9
RAB40C-212ENST00000569575 DHHO43323 396 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 CLDN14O95500 239 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 QDPRP09417 244 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 PSMB1P20618 241 aaKnown RBP20.69■□□□□ 0.9
RAB40C-212ENST00000569575 COX5AP20674 150 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 EPHA2P29317 976 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 POLR2IP36954 125 aaKnown RBP20.69■□□□□ 0.9
RAB40C-212ENST00000569575 RUNX1T1Q06455 604 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 SLC25A30Q5SVS4 291 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 SLC35F1Q5T1Q4 408 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 TMEM236Q5W0B7 351 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 CARD17Q5XLA6 110 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 LRFN4Q6PJG9 635 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 ZBTB46Q86UZ6 589 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 LIX1LQ8IVB5 337 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 CCDC36Q8IYA8 594 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 IQCF1Q8N6M8 205 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 RELL2Q8NC24 303 aaPredicted RBP20.69■□□□□ 0.9
RAB40C-212ENST00000569575 ITLN2Q8WWU7 325 aaPredicted RBP20.69■□□□□ 0.9
RAB40C-212ENST00000569575 NMNAT3Q96T66 252 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 WACQ9BTA9 647 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 ADI1Q9BV57 179 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 RACGAP1Q9H0H5 632 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 GPR35Q9HC97 309 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 IMPAD1Q9NX62 359 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 MOKQ9UQ07 419 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 GPR52Q9Y2T5 361 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 FREM1Q5H8C1 2179 aa20.69■□□□□ 0.9
RAB40C-212ENST00000569575 EEF1E1-BLOC1S5C9J1V9 151 aa20.68■□□□□ 0.9
RAB40C-212ENST00000569575 PRR23D1E9PI22 279 aaPredicted RBP20.68■□□□□ 0.9
RAB40C-212ENST00000569575 EEF1E1O43324 174 aaKnown RBP20.68■□□□□ 0.9
RAB40C-212ENST00000569575 KHDRBS3O75525 346 aaKnown RBP20.68■□□□□ 0.9
RAB40C-212ENST00000569575 UPK3AO75631 287 aa20.68■□□□□ 0.9
RAB40C-212ENST00000569575 PRR23D2P0DMB1 279 aaPredicted RBP20.68■□□□□ 0.9
RAB40C-212ENST00000569575 NPR2P20594 1047 aa20.68■□□□□ 0.9
RAB40C-212ENST00000569575 CAPGP40121 348 aa20.68■□□□□ 0.9
RAB40C-212ENST00000569575 ADARB1P78563 741 aaKnown RBP20.68■□□□□ 0.9
RAB40C-212ENST00000569575 ROR2Q01974 943 aaKnown RBP20.68■□□□□ 0.9
RAB40C-212ENST00000569575 LGALS3BPQ08380 585 aa20.68■□□□□ 0.9
RAB40C-212ENST00000569575 FAPQ12884 760 aa20.68■□□□□ 0.9
RAB40C-212ENST00000569575 MEDAGQ5VYS4 303 aa20.68■□□□□ 0.9
RAB40C-212ENST00000569575 SLC25A47Q6Q0C1 308 aa20.68■□□□□ 0.9
RAB40C-212ENST00000569575 NCCRP1Q6ZVX7 275 aaPredicted RBP20.68■□□□□ 0.9
RAB40C-212ENST00000569575 PTCHD4Q6ZW05 846 aa20.68■□□□□ 0.9
RAB40C-212ENST00000569575 P2RY8Q86VZ1 359 aa20.68■□□□□ 0.9
RAB40C-212ENST00000569575 FAM26EQ8N5C1 309 aa20.68■□□□□ 0.9
RAB40C-212ENST00000569575 SYT14Q8NB59 555 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms