RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 NUDT17P0C025 328 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 UBTFL6P0CB48 400 aaPredicted RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 ANPEPP15144 967 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 TCN1P20061 433 aaPredicted RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 CCNA2P20248 432 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 TAC1P20366 129 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 ACHEP22303 614 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 PAX7P23759 505 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 PHBP35232 272 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 PAFAH1B1P43034 410 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 UBE2NP61088 152 aaKnown RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 SLC35A1P78382 337 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 CAV1Q03135 178 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 BLMHQ13867 455 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 PDE7AQ13946 482 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 KIAA0040Q15053 153 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 GPR68Q15743 365 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 ZNF311Q5JNZ3 666 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 KRT80Q6KB66 452 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 ACSM5Q6NUN0 579 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 C16orf89Q6UX73 402 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 LINGO2Q7L985 606 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 AAED1Q7RTV5 226 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 ADGRG3Q86Y34 549 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 SIGLECL1Q8N7X8 197 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 ZIC4Q8N9L1 334 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 POMGNT2Q8NAT1 580 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 OR4M2Q8NGB6 313 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 CLHC1Q8NHS4 586 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 ZNF563Q8TA94 476 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 NANPQ8TBE9 248 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 NTN5Q8WTR8 489 aaPredicted RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 TAF15Q92804 592 aaKnown RBP eCLIP4.79□□□□□ -1.64
CDH13-211ENST00000568770 BCL2L2Q92843 193 aaPredicted RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 YIPF5Q969M3 257 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 TMEM45BQ96B21 275 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 DAZAP1Q96EP5 407 aaKnown RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 ZNF764Q96H86 408 aaPredicted RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 ZNF385AQ96PM9 386 aaKnown RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 DUX5Q96PT3 197 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 SDF2Q99470 211 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 NAA11Q9BSU3 229 aaPredicted RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 MECRQ9BV79 373 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 MRPL37Q9BZE1 423 aaKnown RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 SLC52A3Q9NQ40 469 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 ZNF275Q9NSD4 429 aaPredicted RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 MED29Q9NX70 200 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 TMEM216Q9P0N5 145 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 TMEM181Q9P2C4 612 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 C11orf21Q9P2W6 132 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 BAIAP2L1Q9UHR4 511 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 ZDHHC2Q9UIJ5 367 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 FAF1Q9UNN5 650 aaPredicted RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 TRAPPC4Q9Y296 219 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 STK38LQ9Y2H1 464 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 SPIN1Q9Y657 262 aaPredicted RBP4.79□□□□□ -1.64
CDH13-211ENST00000568770 SAR1BQ9Y6B6 198 aa4.79□□□□□ -1.64
CDH13-211ENST00000568770 RYR3Q15413 4870 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 IGHV2OR16-5A0A0B4J2B6 119 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 FAM90A18PA6NE21 464 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 FAM90A16PA6NEW6 464 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 DNAJC9-AS1A6NH13 148 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 FAM90A9PA6NNJ1 464 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 FAM90A5PA8MXJ8 464 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 TRIM49D1C9J1S8 452 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 ZNF587BE7ETH6 402 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 J3QLI3 93 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 M0R233 179 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 CLIC1O00299 241 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 ANKRD28O15084 1053 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 SYNGR3O43761 229 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 FCMRO60667 390 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 BCAS1O75363 584 aaPredicted RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 UGT2B17O75795 530 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 MPZL1O95297 269 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 INHBAP08476 426 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 FAM90A15PP0C7V4 464 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 FAM90A14PP0C7W9 464 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 CBR1P16152 277 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 SDC1P18827 310 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 PRTN3P24158 256 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 ATP5F1P24539 256 aaPredicted RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 FKBP2P26885 142 aaKnown RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 RYKP34925 604 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 CCT3P49368 545 aaKnown RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 CLK1P49759 484 aaKnown RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 PRKAA2P54646 552 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 TMEM33P57088 247 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 CFHR3Q02985 330 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 POU3F1Q03052 451 aaPredicted RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 ZP4Q12836 540 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 SNTB2Q13425 540 aaKnown RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 ZNF141Q15928 474 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 SLC9B1Q4ZJI4 515 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 ATP6AP1LQ52LC2 224 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 OTUD3Q5T2D3 398 aaPredicted RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 DCAF12L2Q5VW00 463 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 RBMS3Q6XE24 437 aaKnown RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 ZNF788Q6ZQV5 615 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 EIF3MQ7L2H7 374 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms