RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 CLDN17P56750 224 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 RPS4XP62701 263 aaKnown RBP6.86□□□□□ -1.31
SMG1-214ENST00000568038 POU3F1Q03052 451 aaPredicted RBP6.86□□□□□ -1.31
SMG1-214ENST00000568038 PMPCAQ10713 525 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 MELKQ14680 651 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 SLC17A1Q14916 467 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 RNPS1Q15287 305 aaKnown RBP6.86□□□□□ -1.31
SMG1-214ENST00000568038 EIF2S3LQ2VIR3 472 aaKnown RBP6.86□□□□□ -1.31
SMG1-214ENST00000568038 RFX4Q33E94 735 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 ANKDD1AQ495B1 522 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 EEF1A1P5Q5VTE0 462 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 TMEM236Q5W0B7 351 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 SEM1Q6ZVN7 128 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 NCCRP1Q6ZVX7 275 aaPredicted RBP6.86□□□□□ -1.31
SMG1-214ENST00000568038 SLC35D2Q76EJ3 337 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 UEVLDQ8IX04 471 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 TUSC5Q8IXB3 177 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 SLC43A2Q8N370 569 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 IQCF1Q8N6M8 205 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 LRRC75AQ8NAA5 344 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 ADPRHL1Q8NDY3 354 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 OR9K2Q8NGE7 335 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 OR52L1Q8NGH7 329 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 OR8D4Q8NGM9 314 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 TEX47Q8TBZ9 253 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 RNF128Q8TEB7 428 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 INTS12Q96CB8 462 aaKnown RBP6.86□□□□□ -1.31
SMG1-214ENST00000568038 TXNDC15Q96J42 360 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 ZNF385AQ96PM9 386 aaKnown RBP6.86□□□□□ -1.31
SMG1-214ENST00000568038 TTYH2Q9BSA4 534 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 IFT27Q9BW83 186 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 NDEL1Q9GZM8 345 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 VCXQ9H320 206 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 RNF122Q9H9V4 155 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 MED29Q9NX70 200 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 IL20Q9NYY1 176 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 KLHL9Q9P2J3 617 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 B3GAT1Q9P2W7 334 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 ADAM18Q9Y3Q7 739 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 NOX1Q9Y5S8 564 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 IER3IP1Q9Y5U9 82 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 A0A1W2PNV4 684 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 A0A1W2PRG6 482 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 MBD3L4A6NDZ8 208 aaPredicted RBP6.85□□□□□ -1.31
SMG1-214ENST00000568038 MBD3L3A6NE82 208 aaPredicted RBP6.85□□□□□ -1.31
SMG1-214ENST00000568038 MBD3L5A6NJ08 208 aaPredicted RBP6.85□□□□□ -1.31
SMG1-214ENST00000568038 ZNF716A6NP11 495 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 CCL21O00585 134 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 VAMP5O95183 116 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 BCL10O95999 233 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 CD14P08571 375 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 TSPAN19P0C672 248 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 ZNF20P17024 532 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 CDH2P19022 906 aaPredicted RBP6.85□□□□□ -1.31
SMG1-214ENST00000568038 EPHA2P29317 976 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 TIMP3P35625 211 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 ESRRGP62508 458 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 SIRPAP78324 504 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 NPRL3Q12980 569 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 GINS1Q14691 196 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 PDK3Q15120 406 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 PTGES3Q15185 160 aaKnown RBP6.85□□□□□ -1.31
SMG1-214ENST00000568038 SNCBQ16143 134 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 ACKR1Q16570 336 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 CARD17Q5XLA6 110 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 RPL13AP3Q6NVV1 102 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 DPY19L2P2Q6ZN68 376 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 CREB3L2Q70SY1 520 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 PXKQ7Z7A4 578 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 PARP8Q8N3A8 854 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 MARVELD2Q8N4S9 558 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 PACRGLQ8N7B6 248 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 CLDN22Q8N7P3 220 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 OR4Q3Q8NH05 313 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 MBD3L2Q8NHZ7 208 aaPredicted RBP6.85□□□□□ -1.31
SMG1-214ENST00000568038 Q96M85 177 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 ZNF570Q96NI8 536 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 ERMAPQ96PL5 475 aaPredicted RBP6.85□□□□□ -1.31
SMG1-214ENST00000568038 MBOAT4Q96T53 435 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 EMC6Q9BV81 110 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 KATNB1Q9BVA0 655 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 SF3B5Q9BWJ5 86 aaKnown RBP6.85□□□□□ -1.31
SMG1-214ENST00000568038 POLDIP3Q9BY77 421 aaKnown RBP6.85□□□□□ -1.31
SMG1-214ENST00000568038 VCX3BQ9H321 246 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 TOR3AQ9H497 397 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 C8orf4Q9NR00 106 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 SMPD3Q9NY59 655 aaPredicted RBP6.85□□□□□ -1.31
SMG1-214ENST00000568038 GRHPRQ9UBQ7 328 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 ING1Q9UK53 422 aaPredicted RBP6.85□□□□□ -1.31
SMG1-214ENST00000568038 ZNF346Q9UL40 294 aaKnown RBP6.85□□□□□ -1.31
SMG1-214ENST00000568038 NOSIPQ9Y314 301 aaKnown RBP6.85□□□□□ -1.31
SMG1-214ENST00000568038 FLVCR1Q9Y5Y0 555 aa6.85□□□□□ -1.31
SMG1-214ENST00000568038 LAMA5O15230 3695 aa6.84□□□□□ -1.31
SMG1-214ENST00000568038 PIEZO2Q9H5I5 2752 aa6.84□□□□□ -1.31
SMG1-214ENST00000568038 IGKV3D-15A0A087WSY6 115 aa6.84□□□□□ -1.31
SMG1-214ENST00000568038 TEX13CA0A0J9YWL9 993 aa6.84□□□□□ -1.31
SMG1-214ENST00000568038 LOC102725191A0A1B0GVB3 256 aa6.84□□□□□ -1.31
SMG1-214ENST00000568038 ZNF726A6NNF4 738 aa6.84□□□□□ -1.31
SMG1-214ENST00000568038 ZNF724A8MTY0 619 aa6.84□□□□□ -1.31
SMG1-214ENST00000568038 E9PLN8 166 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms