RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 B3GNT2Q9NY97 397 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 ADAM18Q9Y3Q7 739 aa8.55□□□□□ -1.04
CLK3-220ENST00000567992 DSCAMO60469 2012 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 TCRBV3S1A0A5B6 114 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 DHRS12A0PJE2 317 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 UNC119BA6NIH7 251 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 ANKRD65E5RJM6 399 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 M0R1B8 84 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 HS3ST1O14792 307 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 DHHO43323 396 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 OR10H3O60404 316 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 KRT36O76013 467 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 SLC2A10O95528 541 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 WNT11O96014 354 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 IGKV3-15P01624 115 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 IGLV1-44P01699 117 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 CD14P08571 375 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 CELA3BP08861 270 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 QDPRP09417 244 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 RAP2AP10114 183 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 HOXB1P14653 301 aaPredicted RBP8.54□□□□□ -1.04
CLK3-220ENST00000567992 FPR3P25089 353 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 PTAFRP25105 342 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 HOXC12P31275 282 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 GSSP48637 474 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 CLRN1P58418 232 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 CTXN1P60606 82 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 ERVK-25P63136 954 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 MYBPC1Q00872 1141 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 CHRNB3Q05901 458 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 FMODQ06828 376 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 PPP1R8Q12972 351 aaKnown RBP8.54□□□□□ -1.04
CLK3-220ENST00000567992 FLOT2Q14254 428 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 ZNF672Q499Z4 452 aaPredicted RBP8.54□□□□□ -1.04
CLK3-220ENST00000567992 FAM98BQ52LJ0 330 aaKnown RBP8.54□□□□□ -1.04
CLK3-220ENST00000567992 MESTQ5EB52 335 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 C1orf94Q6P1W5 598 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 TMEM108Q6UXF1 575 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 B3GLCTQ6Y288 498 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 ZNF813Q6ZN06 617 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 C20orf204Q6ZNR8 217 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 RRM2BQ7LG56 351 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 HDDC2Q7Z4H3 204 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 CDK20Q8IZL9 346 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 SYT14Q8NB59 555 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 OR9Q2Q8NGE9 314 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 CANT1Q8WVQ1 401 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 AKAP1Q92667 903 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLK3-220ENST00000567992 HTRA1Q92743 480 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 POP5Q969H6 163 aaKnown RBP8.54□□□□□ -1.04
CLK3-220ENST00000567992 SLCO4A1Q96BD0 722 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 MBD6Q96DN6 1003 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 LRGUKQ96M69 825 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 ZNF75AQ96N20 296 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 FOXB1Q99853 325 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 ALG12Q9BV10 488 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 TRIM15Q9C019 465 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 NRIP3Q9NQ35 241 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 ZNF346Q9UL40 294 aaKnown RBP8.54□□□□□ -1.04
CLK3-220ENST00000567992 UGT2A1Q9Y4X1 527 aa8.54□□□□□ -1.04
CLK3-220ENST00000567992 MAGED1Q9Y5V3 778 aaPredicted RBP8.54□□□□□ -1.04
CLK3-220ENST00000567992 FLNAP21333 2647 aaKnown RBP8.53□□□□□ -1.04
CLK3-220ENST00000567992 H7C1C5 153 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 TNFRSF11BO00300 401 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 ATP5HO75947 161 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 NDUFB2O95178 105 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 HLA-HP01893 362 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 CECR9P0C854 216 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 DANCRP0C864 163 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 ACVR1BP36896 505 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 UBE2NP61088 152 aaKnown RBP8.53□□□□□ -1.04
CLK3-220ENST00000567992 LCN6P62502 163 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 C3orf36Q3SXR2 165 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 FAM205BPQ63HN1 556 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 OR2T5Q6IEZ7 315 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 SLC25A47Q6Q0C1 308 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 KLHL17Q6TDP4 642 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 ZNF620Q6ZNG0 422 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 ASRGL1Q7L266 308 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 MDP1Q86V88 176 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 SKA3Q8IX90 412 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 ARIH2OSQ8N7S6 290 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 ZNF611Q8N823 705 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 FAM169BQ8N8A8 192 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 OR2T29Q8NH02 315 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 FGFBP3Q8TAT2 258 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 FANK1Q8TC84 345 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 UTP4Q969X6 686 aaKnown RBP8.53□□□□□ -1.04
CLK3-220ENST00000567992 NABP1Q96AH0 204 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 RASD2Q96D21 266 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 Q96M85 177 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 SLC38A2Q96QD8 506 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 CHID1Q9BWS9 393 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 CXXC4Q9H2H0 198 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 SMURF2Q9HAU4 748 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 KRCC1Q9NPI7 259 aaPredicted RBP8.53□□□□□ -1.04
CLK3-220ENST00000567992 STX18Q9P2W9 335 aaKnown RBP8.53□□□□□ -1.04
CLK3-220ENST00000567992 IL20RAQ9UHF4 553 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 TMCC3Q9ULS5 477 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 AURKCQ9UQB9 309 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms