RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 PFN4Q8NHR9 129 aa13.1□□□□□ -0.31
CDR2-206ENST00000567406 CLDND2Q8NHS1 167 aa13.1□□□□□ -0.31
CDR2-206ENST00000567406 ZNF566Q969W8 418 aa13.1□□□□□ -0.31
CDR2-206ENST00000567406 ZNF347Q96SE7 839 aa13.1□□□□□ -0.31
CDR2-206ENST00000567406 KAT8Q9H7Z6 458 aaKnown RBP13.1□□□□□ -0.31
CDR2-206ENST00000567406 RNF121Q9H920 327 aa13.1□□□□□ -0.31
CDR2-206ENST00000567406 NPHS2Q9NP85 383 aa13.1□□□□□ -0.31
CDR2-206ENST00000567406 MEPEQ9NQ76 525 aaPredicted RBP13.1□□□□□ -0.31
CDR2-206ENST00000567406 ZNF275Q9NSD4 429 aaPredicted RBP13.1□□□□□ -0.31
CDR2-206ENST00000567406 TMEM38BQ9NVV0 291 aa13.1□□□□□ -0.31
CDR2-206ENST00000567406 TREM2Q9NZC2 230 aa13.1□□□□□ -0.31
CDR2-206ENST00000567406 TRAPPC13A5PLN9 417 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 HAX1O00165 279 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 ANGPT2O15123 496 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 DHHO43323 396 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 HIST1H2ABP04908 130 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 SERPINA5P05154 406 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 C8BP07358 591 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 PGA4P0DJD7 388 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 PGA3P0DJD8 388 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 ITGA2P17301 1181 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 GZMMP51124 257 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 RBBP4Q09028 425 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 ZP4Q12836 540 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 SF3A3Q12874 501 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDR2-206ENST00000567406 HIST3H2AQ7L7L0 130 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 NKAIN4Q8IVV8 208 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 DPP10Q8N608 796 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 SYT14Q8NB59 555 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 ICA1LQ8NDH6 482 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 SLC30A7Q8NEW0 376 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 SLC26A7Q8TE54 656 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 GTF3AQ92664 365 aaKnown RBP13.09□□□□□ -0.31
CDR2-206ENST00000567406 RDH5Q92781 318 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 HIST1H2ACQ93077 130 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 SLC25A44Q96H78 314 aaPredicted RBP13.09□□□□□ -0.31
CDR2-206ENST00000567406 PRSS27Q9BQR3 290 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 MS4A5Q9H3V2 200 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 RABEP2Q9H5N1 569 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 INTS9Q9NV88 658 aaKnown RBP13.09□□□□□ -0.31
CDR2-206ENST00000567406 TAAR3PQ9P1P4 343 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 SLC7A8Q9UHI5 535 aa13.09□□□□□ -0.31
CDR2-206ENST00000567406 FBP2O00757 339 aa13.08□□□□□ -0.32
CDR2-206ENST00000567406 PPIHO43447 177 aaKnown RBP13.08□□□□□ -0.32
CDR2-206ENST00000567406 CDC14BO60729 498 aa13.08□□□□□ -0.32
CDR2-206ENST00000567406 RGS9O75916 674 aaPredicted RBP13.08□□□□□ -0.32
CDR2-206ENST00000567406 BCL10O95999 233 aa13.08□□□□□ -0.32
CDR2-206ENST00000567406 ASAH2BP0C7U1 165 aa13.08□□□□□ -0.32
CDR2-206ENST00000567406 OR8G3PP0DMU2 310 aa13.08□□□□□ -0.32
CDR2-206ENST00000567406 PCGF2P35227 344 aa13.08□□□□□ -0.32
CDR2-206ENST00000567406 CLRN1P58418 232 aa13.08□□□□□ -0.32
CDR2-206ENST00000567406 LIPNQ5VXI9 398 aa13.08□□□□□ -0.32
CDR2-206ENST00000567406 RGS7BPQ6MZT1 257 aaPredicted RBP13.08□□□□□ -0.32
CDR2-206ENST00000567406 LRRC18Q8N456 261 aa13.08□□□□□ -0.32
CDR2-206ENST00000567406 MCHR2Q969V1 340 aa13.08□□□□□ -0.32
CDR2-206ENST00000567406 DENND2DQ9H6A0 471 aaPredicted RBP13.08□□□□□ -0.32
CDR2-206ENST00000567406 EVA1AQ9H8M9 152 aa13.08□□□□□ -0.32
CDR2-206ENST00000567406 ZNF229Q9UJW7 825 aa13.08□□□□□ -0.32
CDR2-206ENST00000567406 TCF21O43680 179 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 LCKP06239 509 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 SAGP10523 405 aaPredicted RBP13.07□□□□□ -0.32
CDR2-206ENST00000567406 FUT1P19526 365 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 CDAP32320 146 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 AQP2P41181 271 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 DVL1P1P54792 670 aaPredicted RBP13.07□□□□□ -0.32
CDR2-206ENST00000567406 UGT2B15P54855 530 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 RPS23P62266 143 aaKnown RBP13.07□□□□□ -0.32
CDR2-206ENST00000567406 CCL8P80075 99 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 GLO1Q04760 184 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 RPL18Q07020 188 aaKnown RBP13.07□□□□□ -0.32
CDR2-206ENST00000567406 NKPD1Q17RQ9 610 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 RABL3Q5HYI8 236 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 AVPI1Q5T686 147 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 THSD4Q6ZMP0 1018 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 SLC16A14Q7RTX9 510 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 NANOGNBQ7Z5D8 188 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 PATL1Q86TB9 770 aaKnown RBP13.07□□□□□ -0.32
CDR2-206ENST00000567406 MOSPD2Q8NHP6 518 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 TMEM255BQ8WV15 326 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 ZNF426Q9BUY5 554 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 OCEL1Q9H607 264 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 METTL17Q9H7H0 456 aaPredicted RBP13.07□□□□□ -0.32
CDR2-206ENST00000567406 VIPAS39Q9H9C1 493 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 CDH20Q9HBT6 801 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 C20orf141Q9NUB4 165 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 HIF1ANQ9NWT6 349 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 SH3GLB1Q9Y371 365 aa13.07□□□□□ -0.32
CDR2-206ENST00000567406 A0A0G2JND7 137 aa13.06□□□□□ -0.32
CDR2-206ENST00000567406 B4DSR2 109 aa13.06□□□□□ -0.32
CDR2-206ENST00000567406 TRMUO75648 421 aaKnown RBP13.06□□□□□ -0.32
CDR2-206ENST00000567406 SASH3O75995 380 aa13.06□□□□□ -0.32
CDR2-206ENST00000567406 FARS2O95363 451 aaKnown RBP13.06□□□□□ -0.32
CDR2-206ENST00000567406 SLC2A10O95528 541 aa13.06□□□□□ -0.32
CDR2-206ENST00000567406 IGHG1P01857 330 aa13.06□□□□□ -0.32
CDR2-206ENST00000567406 ACHEP22303 614 aa13.06□□□□□ -0.32
CDR2-206ENST00000567406 LSP1P33241 339 aa13.06□□□□□ -0.32
CDR2-206ENST00000567406 OR1E2P47887 323 aa13.06□□□□□ -0.32
CDR2-206ENST00000567406 HNRNPA0Q13151 305 aaKnown RBP13.06□□□□□ -0.32
CDR2-206ENST00000567406 LAPTM4AQ15012 233 aa13.06□□□□□ -0.32
CDR2-206ENST00000567406 VMACQ2NL98 169 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms