RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 LCE1AQ5T7P2 110 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 CTRB2Q6GPI1 263 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 TRIM40Q6P9F5 258 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 TMIGD1Q6UXZ0 262 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 UNC93AQ86WB7 457 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 NRMQ8IXM6 262 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 PDIK1LQ8N165 341 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 KIF2BQ8N4N8 673 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 PRELID2Q8N945 189 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 SNX31Q8N9S9 440 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 KLHDC9Q8NEP7 349 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 NOXO1Q8NFA2 376 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 OR10G7Q8NGN6 311 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 TMEM239Q8WW34 195 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 ING5Q8WYH8 240 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 ANKRD7Q92527 254 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 NABP1Q96AH0 204 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 LRRC45Q96CN5 670 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 SEC22AQ96IW7 307 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 NAT9Q9BTE0 207 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 CLEC7AQ9BXN2 247 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 HES7Q9BYE0 225 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 CHIAQ9BZP6 476 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 NMUR2Q9GZQ4 415 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 SRRQ9GZT4 340 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 DEFB129Q9H1M3 183 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 WDR55Q9H6Y2 383 aaPredicted RBP2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 CWH43Q9H720 699 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 MOB1AQ9H8S9 216 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 CAB39LQ9H9S4 337 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 SIRT7Q9NRC8 400 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 ABCC13Q9NSE7 274 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 NECAP2Q9NVZ3 263 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF446Q9NWS9 450 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 CCDC59Q9P031 241 aaKnown RBP2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 B4GALT7Q9UBV7 327 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 DCDC2Q9UHG0 476 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 RIMS3Q9UJD0 308 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 AUP1Q9Y679 476 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 RTEL1-TNFRSF6BF6WH68 1400 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 USP6P35125 1406 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 FGD6Q6ZV73 1430 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 TRAPPC8Q9Y2L5 1435 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 ABCA8O94911 1581 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 ADAMTS12P58397 1594 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 WDR90Q96KV7 1748 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 ADGRA3Q8IWK6 1321 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 SHPRHQ149N8 1683 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 IGLV3-22A0A075B6J6 115 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 A0A087WW49 117 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 GLYATL1P3A0A0U1RQE8 302 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 WDR91A4D1P6 747 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 TVP23AA6NH52 213 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 F6UB75 175 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 K7EN84 100 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 DCTN6O00399 190 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 ITGB1BP1O14713 200 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 PRMT5O14744 637 aaPredicted RBP2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 B4GALT5O43286 388 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 ADAP1O75689 374 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 SCRG1O75711 98 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 GPX5O75715 221 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 CEACAM4O75871 244 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 NXPH4O95158 308 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 TDP2O95551 362 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 LDOC1O95751 146 aaPredicted RBP2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 LSM8O95777 96 aaKnown RBP2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 HBE1P02100 147 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 STSP08842 583 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 PNMA6AP0CW24 399 aaPredicted RBP2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 BGNP21810 368 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 PSMB6P28072 239 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 PCK1P35558 622 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 DDOSTP39656 456 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 TNFSF9P41273 254 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 CSRP3P50461 194 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 DSCR9P59020 149 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 CSNK1G2P78368 415 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 MRPS11P82912 194 aaKnown RBP2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 SLC10A7Q0GE19 358 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 CALCOCO2Q13137 446 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 DGCR6Q14129 220 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 DPYSL3Q14195 570 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 GGTLC2Q14390 218 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 EOGTQ5NDL2 527 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 TPRG1LQ5T0D9 272 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 C9orf57Q5W0N0 161 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 GDPD4Q6W3E5 623 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 C12orf54Q6X4T0 127 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 CERS6Q6ZMG9 384 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 TMPRSS11AQ6ZMR5 421 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 C3P1Q6ZMU1 363 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 BHLHA15Q7RTS1 189 aaPredicted RBP2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 C16orf82Q7Z2V1 217 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 OR2W3Q7Z3T1 314 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 PLA2G4DQ86XP0 818 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 CRLF3Q8IUI8 442 aa2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 CDKL3Q8IVW4 592 aaPredicted RBP2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 PUSL1Q8N0Z8 303 aaKnown RBP2.73□□□□□ -1.97
HERPUD1-211ENST00000566550 LSMEM2Q8N112 164 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms