RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 PDE5AO76074 875 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 IGHMP01871 453 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 QDPRP09417 244 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 INHBBP09529 407 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 HIST3H3Q16695 136 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 TMPRSS11FQ6ZWK6 438 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 ARHGAP24Q8N264 748 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 SLC22A24Q8N4F4 322 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 RBM15BQ8NDT2 890 aaKnown RBP17.26■□□□□ 0.35
CMTM3-211ENST00000565922 NUP37Q8NFH4 326 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 MCHR2Q969V1 340 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 PYURFQ96I23 114 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 NSL1Q96IY1 281 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 MRPL13Q9BYD1 178 aaKnown RBP17.26■□□□□ 0.35
CMTM3-211ENST00000565922 SMURF2Q9HAU4 748 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 CA10Q9NS85 328 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 TMEM38BQ9NVV0 291 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 B3GNT2Q9NY97 397 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 PMF1-BGLAPU3KQ54 211 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 ARFGEF3Q5TH69 2177 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 VPS13CQ709C8 3753 aa17.26■□□□□ 0.35
CMTM3-211ENST00000565922 ARPC2O15144 300 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 TRMUO75648 421 aaKnown RBP17.25■□□□□ 0.35
CMTM3-211ENST00000565922 HLA-HP01893 362 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 MAKP20794 623 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 CALB2P22676 271 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 SMIM11AP58511 58 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 LAPTM4AQ15012 233 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 FGD3Q5JSP0 725 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 ARMC4Q5T2S8 1044 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 LRFN4Q6PJG9 635 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 SLC7A13Q8TCU3 470 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 COX4I2Q96KJ9 171 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 C7orf34Q96L11 122 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 ZNF347Q96SE7 839 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 ALG12Q9BV10 488 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 ACANP16112 2415 aa17.25■□□□□ 0.35
CMTM3-211ENST00000565922 ZNF503-AS2A6NEH8 195 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 A6NIZ1 184 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 B2RBV5 119 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 H7C417 338 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 hCG_2039718K7EN88 272 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 CELA3BP08861 270 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 PTDSS1P48651 473 aaKnown RBP17.24■□□□□ 0.35
CMTM3-211ENST00000565922 ZNF133P52736 654 aaPredicted RBP17.24■□□□□ 0.35
CMTM3-211ENST00000565922 RIPPLY3P57055 190 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 CTXN1P60606 82 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 RAP1BP61224 184 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 RPL27P61353 136 aaKnown RBP17.24■□□□□ 0.35
CMTM3-211ENST00000565922 SNRPD2P62316 118 aaKnown RBP17.24■□□□□ 0.35
CMTM3-211ENST00000565922 RAB1AP62820 205 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 RAP1AP62834 184 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 VLDLRP98155 873 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 CD47Q08722 323 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 TOP3AQ13472 1001 aaPredicted RBP17.24■□□□□ 0.35
CMTM3-211ENST00000565922 RAB35Q15286 201 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 CLEC12BQ2HXU8 276 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 SLC36A2Q495M3 483 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 C10orf128Q5T292 105 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 SYT14Q8NB59 555 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 OR51A7Q8NH64 312 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 MUC13Q9H3R2 512 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 ZNF442Q9H7R0 627 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 SPEF1Q9Y4P9 236 aa17.24■□□□□ 0.35
CMTM3-211ENST00000565922 TRAV27A0A087WT01 109 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 IGHV2OR16-5A0A0B4J2B6 119 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 H7C1Q1 480 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 IGHV4-39P01824 125 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 CALCRP30988 508 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 SERPINF1P36955 418 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 GPR4P46093 362 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 GIPRP48546 466 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 LSM11P83369 360 aaKnown RBP eCLIP17.23■□□□□ 0.35
CMTM3-211ENST00000565922 RUNX1T1Q06455 604 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 PIGFQ07326 219 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 MTX3Q5HYI7 312 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 TMEM53Q6P2H8 277 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 PODNL1Q6PEZ8 512 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 TSEN54Q7Z6J9 526 aaKnown RBP17.23■□□□□ 0.35
CMTM3-211ENST00000565922 FAM86B1Q8N7N1 296 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 OR13C2Q8NGS9 318 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 FBXO17Q96EF6 278 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 RBP7Q96R05 134 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 KCNN2Q9H2S1 579 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 SEC61A2Q9H9S3 476 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 ZNF224Q9NZL3 707 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 ADAM21Q9UKJ8 722 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 V9GYQ6 96 aa17.23■□□□□ 0.35
CMTM3-211ENST00000565922 TRIM64A6NGJ6 449 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 TRIM64BA6NI03 449 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 B9A039 149 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 PTHP01270 115 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 SEMG1P04279 462 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 FABP3P05413 133 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 ZNF14P17017 642 aaPredicted RBP17.22■□□□□ 0.35
CMTM3-211ENST00000565922 NPR2P20594 1047 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 FUT4P22083 530 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 RPL4P36578 427 aaKnown RBP17.22■□□□□ 0.35
CMTM3-211ENST00000565922 ACVR1BP36896 505 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 NUDT6P53370 316 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms