RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 SPNP16150 400 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 AKR1C4P17516 323 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 GALNSP34059 522 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 OR1D5P58170 312 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 SHC2P98077 582 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 HOXA4Q00056 320 aaPredicted RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 CAMK2BQ13554 666 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 HNRNPA1L2Q32P51 320 aaKnown RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 GFOD2Q3B7J2 385 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 SLC36A2Q495M3 483 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 TMEM211Q6ICI0 200 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 SLC18B1Q6NT16 456 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 ZNF584Q8IVC4 421 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 ASB15Q8WXK1 588 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 FAM3CQ92520 227 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 TBC1D20Q96BZ9 403 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 DTD2Q96FN9 168 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 DGAT2Q96PD7 388 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 PINK1Q9BXM7 581 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 DUSP15Q9H1R2 295 aaPredicted RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 SDR39U1Q9NRG7 319 aaPredicted RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 MGAT4CQ9UBM8 478 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 AMMECR1Q9Y4X0 333 aaPredicted RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 LRRK1Q38SD2 2015 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 TRBV5-3A0A0A0MS03 114 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 SC5DO75845 299 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 ACTL6BO94805 426 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 GADD45GO95257 159 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 INHBBP09529 407 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 TCTAP57738 103 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 RRAS2P62070 204 aaPredicted RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 OR7E24Q6IFN5 339 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 NHLRC1Q6VVB1 395 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 RNF44Q7L0R7 432 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 DYNC2LI1Q8TCX1 351 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 CDS1Q92903 461 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 RNF2Q99496 336 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 FEVQ99581 238 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 SULT4A1Q9BR01 284 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 NTMT1Q9BV86 223 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 SLC17A9Q9BYT1 436 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 CHRNA10Q9GZZ6 450 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 KCNK15Q9H427 330 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 NUDT15Q9NV35 164 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 LUZP4Q9P127 313 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 FARSAQ9Y285 508 aaKnown RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 EMC9Q9Y3B6 208 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 TRPM6Q9BX84 2022 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 TERTO14746 1132 aaKnown RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 P04436 131 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 METTL15P1P0C7V9 234 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 F3P13726 295 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 GRB2P62993 217 aaKnown RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 RGNQ15493 299 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 GLYR1Q49A26 553 aaPredicted RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 MINDY4Q4G0A6 757 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 C6orf141Q5SZD1 244 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 HBMQ6B0K9 141 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 KCTD9Q7L273 389 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 CDRT4Q8N9R6 151 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 TMEM255BQ8WV15 326 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 TSEN15Q8WW01 171 aaKnown RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 NEIL1Q96FI4 390 aaPredicted RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 FAM46AQ96IP4 442 aaKnown RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 BARHL1Q9BZE3 327 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 PLA2G12AQ9BZM1 189 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 SLA2Q9H6Q3 261 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 RAB18Q9NP72 206 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 CLEC5AQ9NY25 188 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 ASIC5Q9NY37 505 aa3.08□□□□□ -1.92
CHD9-213ENST00000564845 MUC22E2RYF6 1773 aaPredicted RBP3.08□□□□□ -1.92
CHD9-213ENST00000564845 TMEM212A6NML5 194 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CHRM4P08173 479 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 SEC11BP0C7V7 166 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 EFNA3P52797 238 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 NSDHLQ15738 373 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 IGFBP7Q16270 282 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 NKAIN1Q4KMZ8 207 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 XKR7Q5GH72 579 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 ZNF362Q5T0B9 420 aaPredicted RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 FRRS1Q6ZNA5 592 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 GDPD3Q7L5L3 318 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 ANKRD13BQ86YJ7 626 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 NKAIN4Q8IVV8 208 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 MS4A5Q9H3V2 200 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 GP6Q9HCN6 339 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 BRD7Q9NPI1 651 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 HRASLS2Q9NWW9 162 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 ERVK13-1Q9NX77 482 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 MRPL15Q9P015 296 aaKnown RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 NDRG3Q9UGV2 375 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 TRAV27A0A087WT01 109 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 PRSS38A1L453 326 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CEACAM5P06731 702 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CALCBP10092 127 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 CD46P15529 392 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 IL32P24001 234 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 KIR2DL1P43626 348 aaPredicted RBP3.07□□□□□ -1.92
CHD9-213ENST00000564845 ZP2Q05996 745 aa3.07□□□□□ -1.92
CHD9-213ENST00000564845 MFGE8Q08431 387 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms