RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 MRPL37Q9BZE1 423 aaKnown RBP15.26■□□□□ 0.03
NME3-205ENST00000563854 RNF121Q9H920 327 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 C20orf141Q9NUB4 165 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 TMEM38BQ9NVV0 291 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 FBXO9Q9UK97 447 aaPredicted RBP15.26■□□□□ 0.03
NME3-205ENST00000563854 FZR1Q9UM11 496 aa15.26■□□□□ 0.03
NME3-205ENST00000563854 TMEM129A0AVI4 362 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 PIP5K1CO60331 668 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 ENTPD5O75356 428 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 FARS2O95363 451 aaKnown RBP15.25■□□□□ 0.03
NME3-205ENST00000563854 OR8G3PP0DMU2 310 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 AQP2P41181 271 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 RBM34P42696 430 aaKnown RBP15.25■□□□□ 0.03
NME3-205ENST00000563854 GZMKP49863 264 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 MSMPQ1L6U9 139 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 LRFN4Q6PJG9 635 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 MICU2Q8IYU8 434 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 NOXO1Q8NFA2 376 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 OR4K5Q8NGD3 323 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 MRPL24Q96A35 216 aaKnown RBP15.25■□□□□ 0.03
NME3-205ENST00000563854 ZNF75AQ96N20 296 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 ZNF347Q96SE7 839 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 OR51B6Q9H340 312 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 INIPQ9NRY2 104 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 GMPR2Q9P2T1 348 aaKnown RBP15.25■□□□□ 0.03
NME3-205ENST00000563854 MED31Q9Y3C7 131 aa15.25■□□□□ 0.03
NME3-205ENST00000563854 ELOVL7A1L3X0 281 aa15.24■□□□□ 0.03
NME3-205ENST00000563854 STAMBPO95630 424 aa15.24■□□□□ 0.03
NME3-205ENST00000563854 IFNA2P01563 188 aa15.24■□□□□ 0.03
NME3-205ENST00000563854 ZNF35P13682 527 aa15.24■□□□□ 0.03
NME3-205ENST00000563854 TCN1P20061 433 aaPredicted RBP15.24■□□□□ 0.03
NME3-205ENST00000563854 KDELR2P33947 212 aa15.24■□□□□ 0.03
NME3-205ENST00000563854 DAP3P51398 398 aaKnown RBP15.24■□□□□ 0.03
NME3-205ENST00000563854 ZNF84P51523 738 aa15.24■□□□□ 0.03
NME3-205ENST00000563854 RUNX1T1Q06455 604 aa15.24■□□□□ 0.03
NME3-205ENST00000563854 TOP3AQ13472 1001 aaPredicted RBP15.24■□□□□ 0.03
NME3-205ENST00000563854 PODNL1Q6PEZ8 512 aa15.24■□□□□ 0.03
NME3-205ENST00000563854 MOSPD2Q8NHP6 518 aa15.24■□□□□ 0.03
NME3-205ENST00000563854 NEU4Q8WWR8 484 aaPredicted RBP15.24■□□□□ 0.03
NME3-205ENST00000563854 BEX2Q9BXY8 128 aa15.24■□□□□ 0.03
NME3-205ENST00000563854 POLR2J2Q9GZM3 115 aaKnown RBP15.24■□□□□ 0.03
NME3-205ENST00000563854 POLR2J3Q9H1A7 115 aaKnown RBP15.24■□□□□ 0.03
NME3-205ENST00000563854 CDC42EP3Q9UKI2 254 aa15.24■□□□□ 0.03
NME3-205ENST00000563854 FBXL3Q9UKT7 428 aa15.24■□□□□ 0.03
NME3-205ENST00000563854 LOC100289279A0A1B0GTE1 492 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 LRP5LA4QPB2 252 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 M0R233 179 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 LMX1BO60663 402 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 FAM157BP0CG42 384 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 CCL2P13500 99 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 ALDH3B1P43353 468 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 YAP1P46937 504 aaKnown RBP15.23■□□□□ 0.03
NME3-205ENST00000563854 RPS23P62266 143 aaKnown RBP15.23■□□□□ 0.03
NME3-205ENST00000563854 MAD2L1BPQ15013 274 aaPredicted RBP15.23■□□□□ 0.03
NME3-205ENST00000563854 FAM166AQ6J272 317 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 TMEM53Q6P2H8 277 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 IL17RELQ6ZVW7 336 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 SLC16A14Q7RTX9 510 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 HDDC2Q7Z4H3 204 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 ZNF584Q8IVC4 421 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 LRRC18Q8N456 261 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 ARIH2OSQ8N7S6 290 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 ZNF540Q8NDQ6 660 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 ASB10Q8WXI3 467 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 MCHR2Q969V1 340 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 SHARPINQ9H0F6 387 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 DENND2DQ9H6A0 471 aaPredicted RBP15.23■□□□□ 0.03
NME3-205ENST00000563854 CDH20Q9HBT6 801 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 SLC7A8Q9UHI5 535 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 DUSP13Q9UII6 198 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 KCNS2Q9ULS6 477 aa15.23■□□□□ 0.03
NME3-205ENST00000563854 A0A1W2PPW3 197 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 LYNX1G3V0Z9 82 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 SYNGR3O43761 229 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 TRMUO75648 421 aaKnown RBP15.22■□□□□ 0.03
NME3-205ENST00000563854 ZNF682O95780 498 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 SERPINA5P05154 406 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 IGFBP1P08833 259 aaPredicted RBP15.22■□□□□ 0.03
NME3-205ENST00000563854 LYNX1P0DP58 116 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 IFI30P13284 250 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 ACADSP16219 412 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 IFNA8P32881 189 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 GLRXP35754 106 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 CD47Q08722 323 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 ST3GAL3Q11203 375 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 ALKBH6Q3KRA9 238 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 SLC36A2Q495M3 483 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 CXXC5Q7LFL8 322 aaKnown RBP15.22■□□□□ 0.03
NME3-205ENST00000563854 LRP11Q86VZ4 500 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 MEX3DQ86XN8 651 aaKnown RBP15.22■□□□□ 0.03
NME3-205ENST00000563854 ICA1LQ8NDH6 482 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 SLC30A7Q8NEW0 376 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 UBASH3BQ8TF42 649 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 LZICQ8WZA0 190 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 MSI2Q96DH6 328 aaKnown RBP15.22■□□□□ 0.03
NME3-205ENST00000563854 PRRC1Q96M27 445 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 CMTM6Q9NX76 183 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 MYEF2Q9P2K5 600 aaKnown RBP15.22■□□□□ 0.03
NME3-205ENST00000563854 RHCGQ9UBD6 479 aa15.22■□□□□ 0.03
NME3-205ENST00000563854 REV1Q9UBZ9 1251 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms