RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SHANK1Q9Y566 2161 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 IGKV1-8A0A0C4DH67 115 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 MEX3AA1L020 520 aaKnown RBP4.02□□□□□ -1.77
LINC00254-201ENST00000563416 TMEM89A2RUT3 159 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 SNURFLB1AK76 121 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 SYT7O43581 403 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 IDH3BO43837 385 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 SCRG1O75711 98 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 PIAS1O75925 651 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 KIAA0754O94854 1291 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 SYNGR4O95473 234 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 CAPN1P07384 714 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 RRASP10301 218 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 PSMB5P28074 263 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 AP1S2P56377 157 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 TAS2R39P59534 338 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 LMO4P61968 165 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 TBPL1P62380 186 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 CDKL1Q00532 357 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 MS4A2Q01362 244 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 RELAQ04206 551 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 SNTB2Q13425 540 aaKnown RBP4.02□□□□□ -1.77
LINC00254-201ENST00000563416 FASTKQ14296 549 aaKnown RBP4.02□□□□□ -1.77
LINC00254-201ENST00000563416 DEFB110Q30KQ9 67 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 MOGAT2Q3SYC2 334 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 SULT1C3Q6IMI6 304 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 FCRLAQ7L513 359 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 CHMP1BQ7LBR1 199 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 FAM89BQ8N5H3 189 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 C2orf73Q8N5S3 287 aaPredicted RBP4.02□□□□□ -1.77
LINC00254-201ENST00000563416 LRRC17Q8N6Y2 441 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 KLHDC1Q8N7A1 406 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 EIF1ADQ8N9N8 165 aaKnown RBP4.02□□□□□ -1.77
LINC00254-201ENST00000563416 TRPV3Q8NET8 790 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 STEAP2Q8NFT2 490 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 UBTD2Q8WUN7 234 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 SKA2Q8WVK7 121 aaPredicted RBP4.02□□□□□ -1.77
LINC00254-201ENST00000563416 SMPDL3AQ92484 453 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 NCLNQ969V3 563 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 ELMO2Q96JJ3 720 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 SLC45A3Q96JT2 553 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 FMO2Q99518 471 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 ULBP3Q9BZM4 244 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 PARVBQ9HBI1 364 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 PALMDQ9NP74 551 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 LHX9Q9NQ69 397 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 C6orf203Q9P0P8 240 aaPredicted RBP4.02□□□□□ -1.77
LINC00254-201ENST00000563416 STOX2Q9P2F5 926 aaPredicted RBP4.02□□□□□ -1.77
LINC00254-201ENST00000563416 CIDEBQ9UHD4 219 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 PSORS1C1Q9UIG5 152 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 LNPEPQ9UIQ6 1025 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 IKZF3Q9UKT9 509 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 PDE10AQ9Y233 779 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 CNTRLQ7Z7A1 2325 aa4.02□□□□□ -1.77
LINC00254-201ENST00000563416 C15orf38-AP3S2A0A0A6YYH1 394 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 TRBV5-5A0A0J9YX44 114 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 ANKRD30BLA7E2S9 258 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 MPTX1A8MV57 137 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 C21orf140B9A014 251 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 E7EQ34 232 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 ARPC1BO15143 372 aaKnown RBP4.01□□□□□ -1.77
LINC00254-201ENST00000563416 ZNF749O43361 778 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 SRPX2O60687 465 aaPredicted RBP4.01□□□□□ -1.77
LINC00254-201ENST00000563416 OR2B3O76000 313 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 ATP1B1P05026 303 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 HBQ1P09105 142 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 SLC35E2BP0CK96 405 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 EZRP15311 586 aaKnown RBP4.01□□□□□ -1.77
LINC00254-201ENST00000563416 CD1DP15813 335 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 F8A1P23610 371 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 HTR2AP28223 471 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 CMPK1P30085 196 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 PHBP35232 272 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 RPA3P35244 121 aaPredicted RBP4.01□□□□□ -1.77
LINC00254-201ENST00000563416 SPRP35270 261 aaPredicted RBP4.01□□□□□ -1.77
LINC00254-201ENST00000563416 SLC26A3P40879 764 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 ALDH3B1P43353 468 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 MAGEA12P43365 314 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 SLC6A8P48029 635 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 XGP55808 180 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 RAB10P61026 200 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 PRDX1Q06830 199 aaKnown RBP4.01□□□□□ -1.77
LINC00254-201ENST00000563416 MRPL28Q13084 256 aaKnown RBP4.01□□□□□ -1.77
LINC00254-201ENST00000563416 TSNQ15631 228 aaKnown RBP4.01□□□□□ -1.77
LINC00254-201ENST00000563416 TAB1Q15750 504 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 EXT1Q16394 746 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 SNAI3Q3KNW1 292 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 GLIPR1L2Q4G1C9 344 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 HIST2H2AA3Q6FI13 130 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 RHBDD2Q6NTF9 364 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 AGTRAPQ6RW13 159 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 PAQR6Q6TCH4 344 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 MBOAT1Q6ZNC8 495 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 COX8CQ7Z4L0 72 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 CPEB2Q7Z5Q1 589 aaKnown RBP4.01□□□□□ -1.77
LINC00254-201ENST00000563416 PAQR7Q86WK9 346 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 CTAGE3PQ8IX95 158 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 IFT20Q8IY31 132 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 ZCCHC7Q8N3Z6 543 aaKnown RBP4.01□□□□□ -1.77
LINC00254-201ENST00000563416 OR6M1Q8NGM8 313 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms