RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 ZNF300Q96RE9 604 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 ZNF347Q96SE7 839 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 PIP5K1AQ99755 562 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 PIGQQ9BRB3 760 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 TTYH2Q9BSA4 534 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 THAP7Q9BT49 309 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 FNDC11Q9BVV2 318 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 OR11A1Q9GZK7 315 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 YY1AP1Q9H869 796 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 IL1RAPQ9NPH3 570 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 NRIP3Q9NQ35 241 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 SERINC1Q9NRX5 453 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 QPCTLQ9NXS2 382 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 PLEKHB1Q9UF11 243 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 RIMS3Q9UJD0 308 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 OSGIN1Q9UJX0 560 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 SLC7A7Q9UM01 511 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 A4GNTQ9UNA3 340 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 TMED7Q9Y3B3 224 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 MRPS18CQ9Y3D5 142 aaKnown RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 ZNF337Q9Y3M9 751 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 AP4S1Q9Y587 144 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 MED12LQ86YW9 2145 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 DOCK7Q96N67 2140 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 TMEM72A0PK05 275 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 H0Y3Z8 333 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 GNGT2O14610 69 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 CHP2O43745 196 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 E2F6O75461 281 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 KRT36O76013 467 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 LYPD3O95274 346 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 TGM6O95932 706 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 ACTL6AO96019 429 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 CST1P01037 141 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 THY1P04216 161 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 TPOP07202 933 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 PNMTP11086 282 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 PRF1P14222 555 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 ABOP16442 354 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 ZNF708P17019 499 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 HOXB6P17509 224 aaKnown RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 KLK2P20151 261 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 CHMP24386 653 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 ACVR2AP27037 513 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 ELK4P28324 431 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 RRM2P31350 389 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 CEACAM8P31997 349 aaPredicted RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 APOBEC1P41238 236 aaKnown RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 IST1P53990 364 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 DLX5P56178 289 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 ELF3P78545 371 aaPredicted RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 SRYQ05066 204 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 PMPCAQ10713 525 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 ST3GAL3Q11203 375 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 PPP1R8Q12972 351 aaKnown RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 SELENBP1Q13228 472 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 KLF9Q13886 244 aaPredicted RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 TRAM2Q15035 370 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 CTU2Q2VPK5 515 aaKnown RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 TMEM176BQ3YBM2 270 aaPredicted RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 GLYR1Q49A26 553 aaPredicted RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 IQCCQ4KMZ1 466 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 SYT14P1Q58G82 188 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 SLC25A53Q5H9E4 307 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 CEP78Q5JTW2 689 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 OR2T5Q6IEZ7 315 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 PPP4R4Q6NUP7 873 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 C3orf33Q6P1S2 294 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 ZFP1Q6P2D0 407 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 ZNF730Q6ZMV8 503 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 WDR88Q6ZMY6 472 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 PIWIL3Q7Z3Z3 882 aaKnown RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 NKAIN4Q8IVV8 208 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 C10orf67Q8IYJ2 551 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 C10orf53Q8N6V4 93 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 LSMEM1Q8N8F7 131 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 Q8N9P0 234 aaPredicted RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 OR2T29Q8NH02 315 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 OR52J3Q8NH60 311 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 PPP1R35Q8TAP8 253 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 TMEM255BQ8WV15 326 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 ABTB1Q969K4 478 aaPredicted RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 RPL36ALQ969Q0 106 aaKnown RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 OR5B2Q96R09 309 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 TUBA1CQ9BQE3 449 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 UCK2Q9BZX2 261 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 POLR2J2Q9GZM3 115 aaKnown RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 POLR2J3Q9H1A7 115 aaKnown RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 REEP1Q9H902 201 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 NMNAT1Q9HAN9 279 aaPredicted RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 S100A14Q9HCY8 104 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 MAN2C1Q9NTJ4 1040 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 ALKBH4Q9NXW9 302 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 CHRNA9Q9UGM1 479 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 ACAD8Q9UKU7 415 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 TMCC3Q9ULS5 477 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 CAMK2AQ9UQM7 478 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 RNF6Q9Y252 685 aa4.54□□□□□ -1.68
CNOT1-205ENST00000563283 SAMHD1Q9Y3Z3 626 aaKnown RBP4.54□□□□□ -1.68
CNOT1-205ENST00000563283 SPIN1Q9Y657 262 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms