RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 HRH4Q9H3N8 390 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 SEC61A2Q9H9S3 476 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 TMEM27Q9HBJ8 222 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 GFOD1Q9NXC2 390 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 A0A1W2PPV9 198 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 RDH16O75452 317 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 RBBP9O75884 186 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 NDUFV2P19404 249 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 RAB5CP51148 216 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 TP53I3Q53FA7 332 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 OR10K2Q6IF99 312 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 LIN54Q6MZP7 749 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 ADAM5Q6NVV9 412 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 KISS1RQ969F8 398 aaPredicted RBP12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 GFI1Q99684 422 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 PIGQQ9BRB3 760 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 SLC17A9Q9BYT1 436 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 RHOFQ9HBH0 211 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 ST6GALNAC2Q9UJ37 374 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 MSRAQ9UJ68 235 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 TICRRQ7Z2Z1 1910 aa12.79□□□□□ -0.36
GTF3C1-203ENST00000562609 NUDT19A8MXV4 375 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 YIF1AO95070 293 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 PPP2R1BP30154 601 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 HGFACQ04756 655 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 INPP5JQ15735 1006 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 PRPF38BQ5VTL8 546 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 PWWP2BQ6NUJ5 590 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 LCTLQ6UWM7 567 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 UNQ6494/PRO21346Q6UXR6 183 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 ABHD13Q7L211 337 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 GLB1L2Q8IW92 636 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 RNF141Q8WVD5 230 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 TMED6Q8WW62 240 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 HS6ST2Q96MM7 605 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 NECAB3Q96P71 396 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 POFUT1Q9H488 388 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 ICKQ9UPZ9 632 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 CPED1A4D0V7 1026 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 SULT2B1O00204 365 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 CCSO14618 274 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 EMC8O43402 210 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 PPP1R3DO95685 299 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 CEACAM5P06731 702 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 TMIGD3P0DMS9 266 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 COX5BP10606 129 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 ACKR3P25106 362 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 TMED4Q7Z7H5 227 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 ARL6IP6Q8N6S5 226 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 OR5AP2Q8NGF4 316 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 OR5P2Q8WZ92 322 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 SMPDL3AQ92484 453 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 NEU1Q99519 415 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 OCSTAMPQ9BR26 566 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 CHRDQ9H2X0 955 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 PRDM13Q9H4Q3 707 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 NOX4Q9NPH5 578 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 CLDND1Q9NY35 253 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 SCN2AQ99250 2005 aa12.78□□□□□ -0.36
GTF3C1-203ENST00000562609 ARHGEF17Q96PE2 2063 aaPredicted RBP12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 A0A1W2PPH5 198 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 TMEM72A0PK05 275 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 GLOD5A6NK44 160 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 TCAPO15273 167 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 SLC25A4P12235 298 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 SRMP19623 302 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 RAB5AP20339 215 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 TRHRP34981 398 aaPredicted RBP12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 IGFALSP35858 605 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 ATP1B3P54709 279 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 PRRT3Q5FWE3 981 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 ZNF776Q68DI1 518 aaPredicted RBP12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 IL34Q6ZMJ4 242 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 RHOUQ7L0Q8 258 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 PPP1R1CQ8WVI7 109 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 PMM1Q92871 262 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 ELSPBP1Q96BH3 223 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 PDCD1LG2Q9BQ51 273 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 SYNPO2LQ9H987 977 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 INPP5EQ9NRR6 644 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 PHPT1Q9NRX4 125 aaPredicted RBP12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 TMEM100Q9NV29 134 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 PISDQ9UG56 409 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 OR5V1Q9UGF6 321 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 NTNG1Q9Y2I2 539 aa12.77□□□□□ -0.36
GTF3C1-203ENST00000562609 IGKV1-8A0A0C4DH67 115 aa12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 MEIS3P1A6NDR6 274 aa12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 BTBD17A6NE02 478 aa12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 STMND1H3BQB6 276 aa12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 CDC42EP2O14613 210 aa12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 ADH1BP00325 375 aa12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 OR4E1P0C645 316 aa12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 HOXB2P14652 356 aa12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 RPS11P62280 158 aaKnown RBP eCLIP12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 KHDRBS2Q5VWX1 349 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 ENPP7Q6UWV6 458 aa12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 RFLNBQ8N5W9 214 aa12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 INO80EQ8NBZ0 244 aaPredicted RBP12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 SDR9C7Q8NEX9 313 aa12.77□□□□□ -0.37
GTF3C1-203ENST00000562609 HAVCR1Q96D42 359 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms