RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 SLC16A8O95907 504 aa17■□□□□ 0.31
RAB40C-206ENST00000561781 MELTFP08582 738 aa17■□□□□ 0.31
RAB40C-206ENST00000561781 BUD31P41223 144 aaPredicted RBP17■□□□□ 0.31
RAB40C-206ENST00000561781 PRKXP51817 358 aa17■□□□□ 0.31
RAB40C-206ENST00000561781 DVL1P1P54792 670 aaPredicted RBP17■□□□□ 0.31
RAB40C-206ENST00000561781 RGS8P57771 180 aaPredicted RBP17■□□□□ 0.31
RAB40C-206ENST00000561781 TAS2R41P59536 307 aa17■□□□□ 0.31
RAB40C-206ENST00000561781 EIF5AP63241 154 aaKnown RBP17■□□□□ 0.31
RAB40C-206ENST00000561781 ALG11Q2TAA5 492 aa17■□□□□ 0.31
RAB40C-206ENST00000561781 PIP5KL1Q5T9C9 394 aa17■□□□□ 0.31
RAB40C-206ENST00000561781 LIPNQ5VXI9 398 aa17■□□□□ 0.31
RAB40C-206ENST00000561781 NIPAL3Q6P499 406 aa17■□□□□ 0.31
RAB40C-206ENST00000561781 SLCO4C1Q6ZQN7 724 aa17■□□□□ 0.31
RAB40C-206ENST00000561781 CBARPQ8N350 705 aaPredicted RBP17■□□□□ 0.31
RAB40C-206ENST00000561781 OR2T33Q8NG76 320 aa17■□□□□ 0.31
RAB40C-206ENST00000561781 OR5R1Q8NH85 324 aa17■□□□□ 0.31
RAB40C-206ENST00000561781 AKR1E2Q96JD6 320 aa17■□□□□ 0.31
RAB40C-206ENST00000561781 LMAN1LQ9HAT1 526 aa17■□□□□ 0.31
RAB40C-206ENST00000561781 NPIPB15A6NHN6 443 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-206ENST00000561781 A8MWP6 167 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 FAM157AC9JC47 383 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 H7BY64 318 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 AKAIN1P0CW23 69 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 NDUFS1P28331 727 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 CD80P33681 288 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 GPR4P46093 362 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 ATP1B3P54709 279 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 TFF2Q03403 129 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 DOK5Q9P104 306 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 PLXND1Q9Y4D7 1925 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 ZNF197O14709 1029 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 PPP1R3DO95685 299 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 HKR1P10072 659 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 EPHB3P54753 998 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 OR7A5Q15622 319 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 ZNF750Q32MQ0 723 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 ACTBL2Q562R1 376 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 HIST2H3PS2Q5TEC6 136 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 TPGS2Q68CL5 300 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 PWWP2BQ6NUJ5 590 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 LSRQ86X29 649 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-206ENST00000561781 PHYHIPQ92561 330 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 OR5B2Q96R09 309 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 P2RX2Q9UBL9 471 aa16.99■□□□□ 0.31
RAB40C-206ENST00000561781 IGLV3-16A0A075B6K0 115 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 TEX13DA0A0J9YY54 714 aaPredicted RBP16.98■□□□□ 0.31
RAB40C-206ENST00000561781 ITGB2P05107 769 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 NR2F1P10589 423 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 BMP7P18075 431 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 NME2P22392 152 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 PYCR1P32322 319 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 TCEAL8Q8IYN2 117 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 PRSS35Q8N3Z0 413 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 OR4E2Q8NGC2 313 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 ATG5Q9H1Y0 275 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 ELOA3CA0A087WX78 387 aaPredicted RBP16.98■□□□□ 0.31
RAB40C-206ENST00000561781 RPL36A-HNRNPH2H7BZ11 118 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 CTNSO60931 367 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 RAB3DO95716 219 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 FCGR3AP08637 254 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 CALCBP10092 127 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 CD34P28906 385 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 IMPA1P29218 277 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 GNG10P50151 68 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 OR12D2P58182 307 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 SLBPQ14493 270 aaKnown RBP eCLIP16.98■□□□□ 0.31
RAB40C-206ENST00000561781 RHEBQ15382 184 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 ZNF574Q6ZN55 896 aaPredicted RBP16.98■□□□□ 0.31
RAB40C-206ENST00000561781 SZRD1Q7Z422 152 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 GRASPQ7Z6J2 395 aaPredicted RBP16.98■□□□□ 0.31
RAB40C-206ENST00000561781 OR8D1Q8WZ84 308 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 MIB2Q96AX9 1013 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 CAMK1GQ96NX5 476 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 IP6K3Q96PC2 410 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 RGCCQ9H4X1 137 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 C5AR2Q9P296 337 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 ST6GALNAC2Q9UJ37 374 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 FBXL21Q9UKT6 434 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 SH2B3Q9UQQ2 575 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 GOLT1BQ9Y3E0 138 aa16.98■□□□□ 0.31
RAB40C-206ENST00000561781 CPED1A4D0V7 1026 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 ZNF726A6NNF4 738 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 M0R036 132 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 FOXE1O00358 373 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-206ENST00000561781 FRS3O43559 492 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 ZNF821O75541 412 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-206ENST00000561781 GLSO94925 669 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-206ENST00000561781 MRPL3P09001 348 aaKnown RBP16.97■□□□□ 0.31
RAB40C-206ENST00000561781 ATP1B2P14415 290 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-206ENST00000561781 S1PR1P21453 382 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 CCR2P41597 374 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 RPP30P78346 268 aaKnown RBP16.97■□□□□ 0.31
RAB40C-206ENST00000561781 PLA2G7Q13093 441 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 MRM1Q6IN84 353 aaKnown RBP16.97■□□□□ 0.31
RAB40C-206ENST00000561781 LCTLQ6UWM7 567 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 HIST2H3AQ71DI3 136 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 GJD3Q8N144 294 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 OR5P2Q8WZ92 322 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 SMOC1Q9H4F8 434 aa16.97■□□□□ 0.31
RAB40C-206ENST00000561781 TRPV4Q9HBA0 871 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms