RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 IGF2P01344 180 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 IGHG1P01857 330 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 SERPINA5P05154 406 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 F13BP05160 661 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 ADRA2AP08913 450 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 OR8G3PP0DMU2 310 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 DAOP14920 347 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 AQP2P41181 271 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 SELENOWP63302 87 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 RPL18Q07020 188 aaKnown RBP8.87□□□□□ -0.99
CLK3-205ENST00000561673 GGTLC2Q14390 218 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 RAB39AQ14964 217 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 LAPTM4AQ15012 233 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 HIST3H3Q16695 136 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 CHRFAM7AQ494W8 412 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 LRRC23Q53EV4 343 aaPredicted RBP8.87□□□□□ -0.99
CLK3-205ENST00000561673 NANOGNBQ7Z5D8 188 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 ZNF584Q8IVC4 421 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 MICU2Q8IYU8 434 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 POU5F2Q8N7G0 328 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 SYT14Q8NB59 555 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 OR2T12Q8NG77 320 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 MCHR2Q969V1 340 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 RCN3Q96D15 328 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 SGTBQ96EQ0 304 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 TPD52L3Q96J77 140 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 ZNF347Q96SE7 839 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 MRPL13Q9BYD1 178 aaKnown RBP8.87□□□□□ -0.99
CLK3-205ENST00000561673 MRPL37Q9BZE1 423 aaKnown RBP8.87□□□□□ -0.99
CLK3-205ENST00000561673 MYOZ1Q9NP98 299 aaPredicted RBP8.87□□□□□ -0.99
CLK3-205ENST00000561673 TMEM38BQ9NVV0 291 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 CMTM6Q9NX76 183 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 GMPR2Q9P2T1 348 aaKnown RBP8.87□□□□□ -0.99
CLK3-205ENST00000561673 SPEF1Q9Y4P9 236 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 CAPN7Q9Y6W3 813 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 ARFGEF3Q5TH69 2177 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 ATRQ13535 2644 aa8.87□□□□□ -0.99
CLK3-205ENST00000561673 ELOVL7A1L3X0 281 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 SLC22A2O15244 555 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 TRMUO75648 421 aaKnown RBP8.86□□□□□ -0.99
CLK3-205ENST00000561673 STAMBPO95630 424 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 ERCC1P07992 297 aaPredicted RBP8.86□□□□□ -0.99
CLK3-205ENST00000561673 TSPAN19P0C672 248 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 THRBP10828 461 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 FUT4P22083 530 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 GLRXP35754 106 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 EVX1P49640 407 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 CLRN1P58418 232 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 MYBPC1Q00872 1141 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 FXNQ16595 210 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 IQCCQ4KMZ1 466 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 GKAP1Q5VSY0 366 aaPredicted RBP8.86□□□□□ -0.99
CLK3-205ENST00000561673 LRP11Q86VZ4 500 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 ZNF540Q8NDQ6 660 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 OR4K5Q8NGD3 323 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 MOSPD2Q8NHP6 518 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 RP9Q8TA86 221 aaKnown RBP8.86□□□□□ -0.99
CLK3-205ENST00000561673 NEU4Q8WWR8 484 aaPredicted RBP8.86□□□□□ -0.99
CLK3-205ENST00000561673 LIPHQ8WWY8 451 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 ASB10Q8WXI3 467 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 MRPL24Q96A35 216 aaKnown RBP8.86□□□□□ -0.99
CLK3-205ENST00000561673 SEPHS2Q99611 448 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 BPESC1Q9GZL8 116 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 INIPQ9NRY2 104 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 TMEM160Q9NX00 188 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 FBXL3Q9UKT7 428 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 FZR1Q9UM11 496 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 A4GNTQ9UNA3 340 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 MED31Q9Y3C7 131 aa8.86□□□□□ -0.99
CLK3-205ENST00000561673 COL6A5A8TX70 2615 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 MCIDASD6RGH6 385 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 SYNGR3O43761 229 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 PIP5K1CO60331 668 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 ENTPD5O75356 428 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 FARS2O95363 451 aaKnown RBP8.85□□□□□ -0.99
CLK3-205ENST00000561673 COX4I1P13073 169 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 CCL2P13500 99 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 APEHP13798 732 aaKnown RBP8.85□□□□□ -0.99
CLK3-205ENST00000561673 ACADSP16219 412 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 ZNF16P17020 682 aaPredicted RBP8.85□□□□□ -0.99
CLK3-205ENST00000561673 GIFP27352 417 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 MDH1P40925 334 aaKnown RBP8.85□□□□□ -0.99
CLK3-205ENST00000561673 YAP1P46937 504 aaKnown RBP8.85□□□□□ -0.99
CLK3-205ENST00000561673 GZMKP49863 264 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 DAP3P51398 398 aaKnown RBP8.85□□□□□ -0.99
CLK3-205ENST00000561673 GALK2Q01415 458 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 LIPEQ05469 1076 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 ST3GAL3Q11203 375 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 HSP90B2PQ58FF3 399 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 ARMC4Q5T2S8 1044 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 CXXC5Q7LFL8 322 aaKnown RBP8.85□□□□□ -0.99
CLK3-205ENST00000561673 SLC16A14Q7RTX9 510 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 VTCN1Q7Z7D3 282 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 SLC15A3Q8IY34 581 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 ZNF786Q8N393 782 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 PAQR4Q8N4S7 273 aaPredicted RBP8.85□□□□□ -0.99
CLK3-205ENST00000561673 ARIH2OSQ8N7S6 290 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 SLC30A7Q8NEW0 376 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 UBASH3BQ8TF42 649 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 MSI2Q96DH6 328 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms