RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 PPP1R8Q12972 351 aaKnown RBP11.89□□□□□ -0.51
SMAD3-214ENST00000560402 SLC17A1Q14916 467 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 DUSP7Q16829 419 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 ZSWIM7Q19AV6 140 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 ELOA3BQ3SY89 546 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 IQCCQ4KMZ1 466 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 ZNF691Q5VV52 312 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 DHRS4L2Q6PKH6 230 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 KLHL24Q6TFL4 600 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 CCDC103Q8IW40 242 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 ELOA3Q8NG57 546 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 OR10H5Q8NGA6 315 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 OR4C15Q8NGM1 316 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 VANGL1Q8TAA9 524 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-214ENST00000560402 CNOT9Q92600 299 aaKnown RBP11.89□□□□□ -0.51
SMAD3-214ENST00000560402 SF3B5Q9BWJ5 86 aaKnown RBP11.89□□□□□ -0.51
SMAD3-214ENST00000560402 GABARAPL3Q9BY60 117 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 OBP2BQ9NPH6 170 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 KRCC1Q9NPI7 259 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-214ENST00000560402 SLC17A5Q9NRA2 495 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 YAE1D1Q9NRH1 226 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 SCN3BQ9NY72 215 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 TMEFF2Q9UIK5 374 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-214ENST00000560402 OSGIN1Q9UJX0 560 aa11.89□□□□□ -0.51
SMAD3-214ENST00000560402 YLPM1P49750 1951 aaKnown RBP11.88□□□□□ -0.51
SMAD3-214ENST00000560402 DSPPQ9NZW4 1301 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 IGHV4-30-2A0A087WSY4 118 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 TMEM72A0PK05 275 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 TMEM229AB2RXF0 380 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 AP3D1O14617 1153 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 LGI1O95970 557 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 WNT11O96014 354 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 IMPDH2P12268 514 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 IL7RP16871 459 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 TNFRSF1BP20333 461 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 TACR3P29371 465 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 MPGP29372 298 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 FABP6P51161 128 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 RAB35Q15286 201 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 TMEM249Q2WGJ8 235 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 CHRFAM7AQ494W8 412 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 MRPL2Q5T653 305 aaKnown RBP11.88□□□□□ -0.51
SMAD3-214ENST00000560402 B3GLCTQ6Y288 498 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 TSPYL5Q86VY4 417 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-214ENST00000560402 PARP8Q8N3A8 854 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 POMGNT2Q8NAT1 580 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 GPR32P1Q8NGA4 272 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 ZG16BQ96DA0 208 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 BOD1Q96IK1 185 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 PRRC1Q96M27 445 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 FEVQ99581 238 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 POLR2J2Q9GZM3 115 aaKnown RBP11.88□□□□□ -0.51
SMAD3-214ENST00000560402 POLR2J3Q9H1A7 115 aaKnown RBP11.88□□□□□ -0.51
SMAD3-214ENST00000560402 CCNB1IP1Q9NPC3 277 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 SLC7A10Q9NS82 523 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 TMEM160Q9NX00 188 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 CDC42EP3Q9UKI2 254 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 TPRKBQ9Y3C4 175 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 SNX5Q9Y5X3 404 aa11.88□□□□□ -0.51
SMAD3-214ENST00000560402 MPZL2O60487 215 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 CLIC3O95833 236 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 CCDC159P0C7I6 412 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 CCNA2P20248 432 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 NTF4P34130 210 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 YAP1P46937 504 aaKnown RBP11.87□□□□□ -0.51
SMAD3-214ENST00000560402 RGS8P57771 180 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-214ENST00000560402 TAS2R41P59536 307 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 NPRL3Q12980 569 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 MAPK11Q15759 364 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 RRM2BQ7LG56 351 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 RANBP3LQ86VV4 465 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-214ENST00000560402 OR52P1PQ8NH57 321 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 OR52J3Q8NH60 311 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 FAM168AQ92567 244 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 DNAJA3Q96EY1 480 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 DHRS1Q96LJ7 313 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 TNFRSF13CQ96RJ3 184 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 PITX2Q99697 317 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 REPIN1Q9BWE0 567 aaKnown RBP11.87□□□□□ -0.51
SMAD3-214ENST00000560402 ANKRD19PQ9H560 264 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 MOV10Q9HCE1 1003 aaKnown RBP11.87□□□□□ -0.51
SMAD3-214ENST00000560402 IMPAD1Q9NX62 359 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 LPAR3Q9UBY5 353 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 PMF1-BGLAPU3KQ54 211 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 STAB1Q9NY15 2570 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 CUBNO60494 3623 aa11.87□□□□□ -0.51
SMAD3-214ENST00000560402 ARFGEF3Q5TH69 2177 aa11.86□□□□□ -0.51
SMAD3-214ENST00000560402 A0A1W2PR80 420 aa11.86□□□□□ -0.51
SMAD3-214ENST00000560402 A0A1W2PRQ8 180 aa11.86□□□□□ -0.51
SMAD3-214ENST00000560402 CDHR4A6H8M9 788 aa11.86□□□□□ -0.51
SMAD3-214ENST00000560402 CCDC160A6NGH7 325 aa11.86□□□□□ -0.51
SMAD3-214ENST00000560402 OR6C65A6NJZ3 312 aa11.86□□□□□ -0.51
SMAD3-214ENST00000560402 LIPT2A6NK58 231 aa11.86□□□□□ -0.51
SMAD3-214ENST00000560402 AQP7P3A6NL99 342 aa11.86□□□□□ -0.51
SMAD3-214ENST00000560402 MRPS14O60783 128 aaKnown RBP11.86□□□□□ -0.51
SMAD3-214ENST00000560402 NOL3O60936 208 aaKnown RBP11.86□□□□□ -0.51
SMAD3-214ENST00000560402 VAMP5O95183 116 aa11.86□□□□□ -0.51
SMAD3-214ENST00000560402 GSTM3P21266 225 aa11.86□□□□□ -0.51
SMAD3-214ENST00000560402 CXCR1P25024 350 aa11.86□□□□□ -0.51
SMAD3-214ENST00000560402 APOBEC3AP31941 199 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms