RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 SP5Q6BEB4 398 aaPredicted RBP19.12■□□□□ 0.65
SNX1-210ENST00000560260 GPR139Q6DWJ6 353 aa19.12■□□□□ 0.65
SNX1-210ENST00000560260 OR52L1Q8NGH7 329 aa19.12■□□□□ 0.65
SNX1-210ENST00000560260 OR1K1Q8NGR3 316 aa19.12■□□□□ 0.65
SNX1-210ENST00000560260 MCHR2Q969V1 340 aa19.12■□□□□ 0.65
SNX1-210ENST00000560260 WFIKKN1Q96NZ8 548 aa19.12■□□□□ 0.65
SNX1-210ENST00000560260 ZNF556Q9HAH1 456 aa19.12■□□□□ 0.65
SNX1-210ENST00000560260 PAPOLBQ9NRJ5 636 aaKnown RBP19.12■□□□□ 0.65
SNX1-210ENST00000560260 CRIM1Q9NZV1 1036 aa19.12■□□□□ 0.65
SNX1-210ENST00000560260 STX18Q9P2W9 335 aaKnown RBP19.12■□□□□ 0.65
SNX1-210ENST00000560260 ANKHD1Q8IWZ3 2542 aaKnown RBP19.12■□□□□ 0.65
SNX1-210ENST00000560260 QDPRP09417 244 aa19.11■□□□□ 0.65
SNX1-210ENST00000560260 ANPEPP15144 967 aa19.11■□□□□ 0.65
SNX1-210ENST00000560260 HIST1H1CP16403 213 aaKnown RBP19.11■□□□□ 0.65
SNX1-210ENST00000560260 CDKN2AP42771 156 aaKnown RBP19.11■□□□□ 0.65
SNX1-210ENST00000560260 ARF1P84077 181 aaKnown RBP19.11■□□□□ 0.65
SNX1-210ENST00000560260 CD47Q08722 323 aa19.11■□□□□ 0.65
SNX1-210ENST00000560260 SLC35F1Q5T1Q4 408 aa19.11■□□□□ 0.65
SNX1-210ENST00000560260 ABHD12BQ7Z5M8 362 aaPredicted RBP19.11■□□□□ 0.65
SNX1-210ENST00000560260 STEAP2Q8NFT2 490 aa19.11■□□□□ 0.65
SNX1-210ENST00000560260 SPOCK3Q9BQ16 436 aa19.11■□□□□ 0.65
SNX1-210ENST00000560260 B3GAT2Q9NPZ5 323 aa19.11■□□□□ 0.65
SNX1-210ENST00000560260 POFUT2Q9Y2G5 429 aa19.11■□□□□ 0.65
SNX1-210ENST00000560260 CIB4A0PJX0 185 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 SLC22A23A1A5C7 686 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 PRSS37A4D1T9 235 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 SH3D21A4FU49 640 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 H3BN98 237 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 EI24O14681 340 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 DHHO43323 396 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 PGGHGQ32M88 737 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 SLC25A47Q6Q0C1 308 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 SEZ6L2Q6UXD5 910 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 PARP8Q8N3A8 854 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 LNX2Q8N448 690 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 C1orf162Q8NEQ5 155 aaPredicted RBP19.1■□□□□ 0.65
SNX1-210ENST00000560260 TEX47Q8TBZ9 253 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 DNAJC9Q8WXX5 260 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 HTRA1Q92743 480 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 MUS81Q96NY9 551 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 OSBPL10Q9BXB5 764 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 HDHD5Q9BXW7 423 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 OR10A4Q9H209 315 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 KRT84Q9NSB2 600 aa19.1■□□□□ 0.65
SNX1-210ENST00000560260 PRR14LQ5THK1 2151 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 TUBAL3A6NHL2 446 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 OR5H1A6NKK0 313 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 ZNF99A8MXY4 864 aaPredicted RBP19.09■□□□□ 0.65
SNX1-210ENST00000560260 XKRYO14609 159 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 POU1F1P28069 291 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 DAG1Q14118 895 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 TAB1Q15750 504 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 STK11Q15831 433 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 TBRG1Q3YBR2 411 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 HIKESHIQ53FT3 197 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 ZNF362Q5T0B9 420 aaPredicted RBP19.09■□□□□ 0.65
SNX1-210ENST00000560260 C10orf128Q5T292 105 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 WDR31Q8NA23 367 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 SDR9C7Q8NEX9 313 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 OR2T33Q8NG76 320 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 OR4K13Q8NH42 304 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 BCL2L2Q92843 193 aaPredicted RBP19.09■□□□□ 0.65
SNX1-210ENST00000560260 VSX1Q9NZR4 365 aaPredicted RBP19.09■□□□□ 0.65
SNX1-210ENST00000560260 UGT2A1Q9Y4X1 527 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 HECTD1Q9ULT8 2610 aa19.09■□□□□ 0.65
SNX1-210ENST00000560260 A0A096LPE4 126 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 A0A1W2PPZ6 126 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 A0A1W2PR80 420 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 IGFBP5P24593 272 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 EPHA2P29317 976 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 KIR2DL3P43628 341 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 ACSM5Q6NUN0 579 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 LEG1Q6P5S2 330 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 KLHL24Q6TFL4 600 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 ADCK1Q86TW2 530 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 CBR4Q8N4T8 237 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 NSMAFQ92636 917 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 ZC3HAV1LQ96H79 300 aaKnown RBP19.08■□□□□ 0.65
SNX1-210ENST00000560260 BOD1Q96IK1 185 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 NMNAT3Q96T66 252 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 SLC29A1Q99808 456 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 FOXB1Q99853 325 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 MED18Q9BUE0 208 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 SYT4Q9H2B2 425 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 FN3KQ9H479 309 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 SLC17A5Q9NRA2 495 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 USE1Q9NZ43 259 aa19.08■□□□□ 0.65
SNX1-210ENST00000560260 ZNF503-AS2A6NEH8 195 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 IDH3BO43837 385 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 ALPLP05186 524 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 B4GALT1P15291 398 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 CTLA4P16410 223 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 GRK5P34947 590 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 CRISP1P54107 249 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 SH3BGRP55822 239 aaPredicted RBP19.07■□□□□ 0.64
SNX1-210ENST00000560260 CDK5Q00535 292 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.07■□□□□ 0.64
SNX1-210ENST00000560260 GINS1Q14691 196 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 ETFDHQ16134 617 aa19.07■□□□□ 0.64
SNX1-210ENST00000560260 TMEM236Q5W0B7 351 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms