RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 PCDHGB5Q9Y5G0 923 aa18.12■□□□□ 0.49
PSEN1-225ENST00000560005 TMED7-TICAM2A0A0A6YYA0 188 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 SNTNA6NMZ2 147 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 A8MVM7 634 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 KPNA4O00629 521 aaPredicted RBP18.11■□□□□ 0.49
PSEN1-225ENST00000560005 OR2T1O43869 369 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 HIST1H2ABP04908 130 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 DANCRP0C864 163 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 FUT1P19526 365 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 ADH6P28332 368 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 PRPS1P60891 318 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 LSM11P83369 360 aaKnown RBP eCLIP18.11■□□□□ 0.49
PSEN1-225ENST00000560005 TMEM44Q2T9K0 475 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 SLC25A30Q5SVS4 291 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 ADAM5Q6NVV9 412 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 SMARCD3Q6STE5 483 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 HIST3H2AQ7L7L0 130 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 FADS6Q8N9I5 356 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 OR2M3Q8NG83 312 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 OR6K3Q8NGY3 331 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 IPCEF1Q8WWN9 437 aaPredicted RBP18.11■□□□□ 0.49
PSEN1-225ENST00000560005 HIST1H2ACQ93077 130 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 FBXW5Q969U6 566 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 SERINC1Q9NRX5 453 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 C20orf141Q9NUB4 165 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 MED11Q9P086 117 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 TMED7Q9Y3B3 224 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 RNF115Q9Y4L5 304 aa18.11■□□□□ 0.49
PSEN1-225ENST00000560005 SPIN1Q9Y657 262 aaPredicted RBP18.11■□□□□ 0.49
PSEN1-225ENST00000560005 TRAV36DV7A0A075B6V5 113 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 OR2M5A3KFT3 312 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 ZNF208O43345 1280 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 GPRIN2O60269 458 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 NDUFS7O75251 213 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 PTP4A3O75365 173 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 OR7A10O76100 309 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 CLPTM1O96005 669 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 MT-ATP6P00846 226 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 FCGR2AP12318 317 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 PRKCAP17252 672 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 CRHBPP24387 322 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 EEF1B2P24534 225 aaKnown RBP18.1■□□□□ 0.49
PSEN1-225ENST00000560005 ELK4P28324 431 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 SLC6A6P31641 620 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 RPS3AP61247 264 aaKnown RBP18.1■□□□□ 0.49
PSEN1-225ENST00000560005 MFSD13AQ14CX5 517 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 SGCBQ16585 318 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 CTU2Q2VPK5 515 aaKnown RBP18.1■□□□□ 0.49
PSEN1-225ENST00000560005 FANK1Q8TC84 345 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 SMAP2Q8WU79 429 aaPredicted RBP18.1■□□□□ 0.49
PSEN1-225ENST00000560005 ZBTB8AQ96BR9 441 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 PLEKHA8Q96JA3 519 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 C19orf24Q9BVV8 132 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 OR52D1Q9H346 318 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 SIGLEC7Q9Y286 467 aa18.1■□□□□ 0.49
PSEN1-225ENST00000560005 SLC1A7O00341 560 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 CDC42EP2O14613 210 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 NDUFB2O95178 105 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 PLGP00747 810 aaPredicted RBP18.09■□□□□ 0.49
PSEN1-225ENST00000560005 GRK5P34947 590 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 FAPQ12884 760 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 TOMM34Q15785 309 aaPredicted RBP18.09■□□□□ 0.49
PSEN1-225ENST00000560005 SNAPC1Q16533 368 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 OCLNQ16625 522 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 GLYR1Q49A26 553 aaPredicted RBP18.09■□□□□ 0.49
PSEN1-225ENST00000560005 TMEM236Q5W0B7 351 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 ADGRG3Q86Y34 549 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 NEUROG1Q92886 237 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 PRRG4Q9BZD6 226 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 EGLN3Q9H6Z9 239 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 FKRPQ9H9S5 495 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 VCX3AQ9NNX9 186 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 FANCFQ9NPI8 374 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 NANSQ9NR45 359 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 TVP23BQ9NYZ1 205 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 ZNF229Q9UJW7 825 aa18.09■□□□□ 0.49
PSEN1-225ENST00000560005 IGKV1D-42A0A075B6H8 117 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 LINC01387J3KSC0 135 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 IDH3BO43837 385 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 NTN1O95631 604 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 CH25HO95992 272 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 GABRB1P18505 474 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 CLK1P49759 484 aaKnown RBP18.08■□□□□ 0.48
PSEN1-225ENST00000560005 PGGHGQ32M88 737 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 C10orf53Q8N6V4 93 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 BPIFB6Q8NFQ5 453 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 CNIH3Q8TBE1 160 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 DDIT4LQ96D03 193 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 C1GALT1C1Q96EU7 318 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 SAMD8Q96LT4 415 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 POTEKPQ9BYX7 375 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 CHRNA9Q9UGM1 479 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 GDF2Q9UK05 429 aaPredicted RBP18.08■□□□□ 0.48
PSEN1-225ENST00000560005 GPR52Q9Y2T5 361 aa18.08■□□□□ 0.48
PSEN1-225ENST00000560005 GMFGO60234 142 aa18.07■□□□□ 0.48
PSEN1-225ENST00000560005 FAM20BO75063 409 aa18.07■□□□□ 0.48
PSEN1-225ENST00000560005 SS18L1O75177 396 aaPredicted RBP18.07■□□□□ 0.48
PSEN1-225ENST00000560005 AHSA1O95433 338 aa18.07■□□□□ 0.48
PSEN1-225ENST00000560005 RPL5P46777 297 aaKnown RBP18.07■□□□□ 0.48
PSEN1-225ENST00000560005 EIF1AXP47813 144 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms