RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 GABRA6Q16445 453 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 LRFN4Q6PJG9 635 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 LNX2Q8N448 690 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 C17orf78Q8N4C9 275 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 OR2T33Q8NG76 320 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 OR1K1Q8NGR3 316 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 FNDC8Q8TC99 324 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 MCHR2Q969V1 340 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 BOD1Q96IK1 185 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 CIB1Q99828 191 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 USB1Q9BQ65 265 aaKnown RBP19.04■□□□□ 0.64
SNX1-206ENST00000559389 OSBPL10Q9BXB5 764 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 NELFAQ9H3P2 528 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 KRT84Q9NSB2 600 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 TMEFF2Q9UIK5 374 aaPredicted RBP19.04■□□□□ 0.64
SNX1-206ENST00000559389 BAIAP2Q9UQB8 552 aa19.04■□□□□ 0.64
SNX1-206ENST00000559389 PRSS37A4D1T9 235 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 SH3D21A4FU49 640 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 OR5H1A6NKK0 313 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 ZNF99A8MXY4 864 aaPredicted RBP19.03■□□□□ 0.64
SNX1-206ENST00000559389 DHHO43323 396 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 AHCYL1O43865 530 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 BAG2O95816 211 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 QDPRP09417 244 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 HIST1H1CP16403 213 aaKnown RBP19.03■□□□□ 0.64
SNX1-206ENST00000559389 COL8A1P27658 744 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 MYBPC1Q00872 1141 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 PGGHGQ32M88 737 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 C10orf128Q5T292 105 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 SP5Q6BEB4 398 aaPredicted RBP19.03■□□□□ 0.64
SNX1-206ENST00000559389 OR7E24Q6IFN5 339 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 PTCHD4Q6ZW05 846 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 LINC01560Q8TB33 94 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 MUS81Q96NY9 551 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 SNX18Q96RF0 628 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 VSX1Q9NZR4 365 aaPredicted RBP19.03■□□□□ 0.64
SNX1-206ENST00000559389 CRIM1Q9NZV1 1036 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 ICE1Q9Y2F5 2266 aa19.03■□□□□ 0.64
SNX1-206ENST00000559389 IGKV1D-43A0A0B4J1Z2 117 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 SLC22A23A1A5C7 686 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 EI24O14681 340 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 MITFO75030 526 aaPredicted RBP19.02■□□□□ 0.64
SNX1-206ENST00000559389 SLC2A10O95528 541 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 ANPEPP15144 967 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 CDH2P19022 906 aaPredicted RBP19.02■□□□□ 0.64
SNX1-206ENST00000559389 IGFBP5P24593 272 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 NOS3P29474 1203 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 KIR2DL3P43628 341 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 ARF1P84077 181 aaKnown RBP19.02■□□□□ 0.64
SNX1-206ENST00000559389 TIMM23BQ5SRD1 257 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 ANKRD16Q6P6B7 361 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 ZNF627Q7L945 461 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 IQCF1Q8N6M8 205 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 DACH2Q96NX9 599 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 WFIKKN1Q96NZ8 548 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 FOXB1Q99853 325 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 RBM4BQ9BQ04 359 aaKnown RBP19.02■□□□□ 0.64
SNX1-206ENST00000559389 MED18Q9BUE0 208 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 RBM4Q9BWF3 364 aaKnown RBP19.02■□□□□ 0.64
SNX1-206ENST00000559389 SLC24A3Q9HC58 644 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 USE1Q9NZ43 259 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 NDRG3Q9UGV2 375 aa19.02■□□□□ 0.64
SNX1-206ENST00000559389 RRP9O43818 475 aaKnown RBP19.01■□□□□ 0.63
SNX1-206ENST00000559389 SEC14L2O76054 403 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 THBDP07204 575 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 COX6B1P14854 86 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 CDKN2AP42771 156 aaKnown RBP19.01■□□□□ 0.63
SNX1-206ENST00000559389 DAG1Q14118 895 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 TBRG1Q3YBR2 411 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 THEM4Q5T1C6 240 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 SLC27A4Q6P1M0 643 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 SLC25A47Q6Q0C1 308 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 C22orf34Q6ZV56 151 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 P2RY8Q86VZ1 359 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 JAZF1Q86VZ6 243 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 OR4K13Q8NH42 304 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 FAM222BQ8WU58 562 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 BCL2L2Q92843 193 aaPredicted RBP19.01■□□□□ 0.63
SNX1-206ENST00000559389 C9orf16Q9BUW7 83 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 SYT4Q9H2B2 425 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 SLC25A19Q9HC21 320 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 SLC17A5Q9NRA2 495 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 UGT2A1Q9Y4X1 527 aa19.01■□□□□ 0.63
SNX1-206ENST00000559389 ALPLP05186 524 aa19■□□□□ 0.63
SNX1-206ENST00000559389 POU1F1P28069 291 aa19■□□□□ 0.63
SNX1-206ENST00000559389 GRK5P34947 590 aa19■□□□□ 0.63
SNX1-206ENST00000559389 ESRRGP62508 458 aa19■□□□□ 0.63
SNX1-206ENST00000559389 KHDRBS1Q07666 443 aaKnown RBP eCLIP19■□□□□ 0.63
SNX1-206ENST00000559389 TAB1Q15750 504 aa19■□□□□ 0.63
SNX1-206ENST00000559389 HIKESHIQ53FT3 197 aa19■□□□□ 0.63
SNX1-206ENST00000559389 SLC35F1Q5T1Q4 408 aa19■□□□□ 0.63
SNX1-206ENST00000559389 SEZ6L2Q6UXD5 910 aa19■□□□□ 0.63
SNX1-206ENST00000559389 CBR4Q8N4T8 237 aa19■□□□□ 0.63
SNX1-206ENST00000559389 SDR9C7Q8NEX9 313 aa19■□□□□ 0.63
SNX1-206ENST00000559389 OR52E2Q8NGJ4 325 aa19■□□□□ 0.63
SNX1-206ENST00000559389 RBP7Q96R05 134 aa19■□□□□ 0.63
SNX1-206ENST00000559389 NMNAT3Q96T66 252 aa19■□□□□ 0.63
SNX1-206ENST00000559389 TMEM38BQ9NVV0 291 aa19■□□□□ 0.63
SNX1-206ENST00000559389 KCNN3Q9UGI6 736 aa19■□□□□ 0.63
SNX1-206ENST00000559389 ENOPH1Q9UHY7 261 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms