RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 IGHG1P01857 330 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 QDPRP09417 244 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 B4GALT1P15291 398 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 ACVR1BP36896 505 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 DAP3P51398 398 aaKnown RBP9.99□□□□□ -0.81
SNX1-204ENST00000559061 PRPS1P60891 318 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 GABPB1Q06547 395 aaPredicted RBP9.99□□□□□ -0.81
SNX1-204ENST00000559061 STK11Q15831 433 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 ETFDHQ16134 617 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 RFX4Q33E94 735 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 ZNF362Q5T0B9 420 aaPredicted RBP9.99□□□□□ -0.81
SNX1-204ENST00000559061 C10orf128Q5T292 105 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 SMARCD3Q6STE5 483 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 KLHL24Q6TFL4 600 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 FOXL2NBQ6ZUU3 175 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 RRM2BQ7LG56 351 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 GPR137CQ8N3F9 429 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 C17orf78Q8N4C9 275 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 ARIH2OSQ8N7S6 290 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 MAGEE2Q8TD90 523 aaPredicted RBP9.99□□□□□ -0.81
SNX1-204ENST00000559061 LRTOMTQ8WZ04 291 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 GTPBP3Q969Y2 492 aaKnown RBP9.99□□□□□ -0.81
SNX1-204ENST00000559061 DDOQ99489 341 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 ULBP2Q9BZM5 246 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 LIME1Q9H400 295 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 PLEKHF2Q9H8W4 249 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 B3GNT2Q9NY97 397 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 NDRG3Q9UGV2 375 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 TMCC3Q9ULS5 477 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 CDH10Q9Y6N8 788 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 LRBAP50851 2863 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 POLQO75417 2590 aa9.99□□□□□ -0.81
SNX1-204ENST00000559061 CIB4A0PJX0 185 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 SLC22A23A1A5C7 686 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 ZNF726A6NNF4 738 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 CENPBD1B2RD01 187 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 ANKRD65E5RJM6 399 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 DCTN6O00399 190 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 DHHO43323 396 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 ENTPD5O75356 428 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 SOX14O95416 240 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 STAMBPO95630 424 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 CELA3BP08861 270 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 CTLA4P16410 223 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 SSTR2P30874 369 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 SDHAP31040 664 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 CDKN2AP42771 156 aaKnown RBP9.98□□□□□ -0.81
SNX1-204ENST00000559061 KRR1Q13601 381 aaKnown RBP9.98□□□□□ -0.81
SNX1-204ENST00000559061 PPA1Q15181 289 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 TAF11Q15544 211 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 NCMAPQ5T1S8 102 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 FAHD1Q6P587 224 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 ANKRD16Q6P6B7 361 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 SHQ1Q6PI26 577 aaKnown RBP9.98□□□□□ -0.81
SNX1-204ENST00000559061 CD300LDQ6UXZ3 194 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 DPY19L2P2Q6ZN68 376 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 RASSF6Q6ZTQ3 369 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 AMIGO2Q86SJ2 522 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 CDC20BQ86Y33 519 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 CDK20Q8IZL9 346 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 OR6N1Q8NGY5 312 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 GIPC3Q8TF64 312 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 HSD17B8Q92506 261 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 NEUROG1Q92886 237 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 PIK3IP1Q96FE7 263 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 PLPPR2Q96GM1 343 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 FOXB1Q99853 325 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 ALG12Q9BV10 488 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 C1QTNF6Q9BXI9 259 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 TMEM38BQ9NVV0 291 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 IL20Q9NYY1 176 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 PDP1Q9P0J1 537 aaPredicted RBP9.98□□□□□ -0.81
SNX1-204ENST00000559061 CRNNQ9UBG3 495 aaPredicted RBP9.98□□□□□ -0.81
SNX1-204ENST00000559061 AP4S1Q9Y587 144 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 IER3IP1Q9Y5U9 82 aa9.98□□□□□ -0.81
SNX1-204ENST00000559061 SOCS2O14508 198 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 ARPC3O15145 178 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 CIB2O75838 187 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 KRT33AO76009 404 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 IGLV1-44P01699 117 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 PATE4P0C8F1 98 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 APEHP13798 732 aaKnown RBP9.97□□□□□ -0.81
SNX1-204ENST00000559061 HIST1H1CP16403 213 aaKnown RBP9.97□□□□□ -0.81
SNX1-204ENST00000559061 HOXB6P17509 224 aaKnown RBP9.97□□□□□ -0.81
SNX1-204ENST00000559061 CDAP32320 146 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 RPL4P36578 427 aaKnown RBP9.97□□□□□ -0.81
SNX1-204ENST00000559061 DAPP51397 102 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 SH3BGRP55822 239 aaPredicted RBP9.97□□□□□ -0.81
SNX1-204ENST00000559061 CLRN1P58418 232 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 BSPH1Q075Z2 132 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 GK3PQ14409 553 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 CLEC12AQ5QGZ9 265 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 OTPQ5XKR4 325 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 OR7E24Q6IFN5 339 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 ALKBH2Q6NS38 261 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 B3GLCTQ6Y288 498 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 ABHD12BQ7Z5M8 362 aaPredicted RBP9.97□□□□□ -0.81
SNX1-204ENST00000559061 P2RY8Q86VZ1 359 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 SKA3Q8IX90 412 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 LINC00471Q8N535 108 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms