RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 GLTPQ9NZD2 209 aa14.09□□□□□ -0.15
AP4E1-202ENST00000558439 CD34P28906 385 aa14.09□□□□□ -0.15
AP4E1-202ENST00000558439 S100A10P60903 97 aa14.09□□□□□ -0.15
AP4E1-202ENST00000558439 ST3GAL2Q16842 350 aa14.09□□□□□ -0.15
AP4E1-202ENST00000558439 COL28A1Q2UY09 1125 aa14.09□□□□□ -0.15
AP4E1-202ENST00000558439 AWAT2Q6E213 333 aa14.09□□□□□ -0.15
AP4E1-202ENST00000558439 ASXL3Q9C0F0 2248 aa14.09□□□□□ -0.15
AP4E1-202ENST00000558439 DCNP07585 359 aaKnown RBP14.08□□□□□ -0.15
AP4E1-202ENST00000558439 ZNF28P17035 718 aa14.08□□□□□ -0.15
AP4E1-202ENST00000558439 NFYAP23511 347 aaPredicted RBP14.08□□□□□ -0.15
AP4E1-202ENST00000558439 DMRTC1Q5HYR2 192 aa14.08□□□□□ -0.15
AP4E1-202ENST00000558439 RAB12Q6IQ22 244 aa14.08□□□□□ -0.15
AP4E1-202ENST00000558439 LYPD8Q6UX82 237 aa14.08□□□□□ -0.15
AP4E1-202ENST00000558439 IDO2Q6ZQW0 420 aa14.08□□□□□ -0.15
AP4E1-202ENST00000558439 CMIPQ8IY22 773 aa14.08□□□□□ -0.15
AP4E1-202ENST00000558439 SHISA5Q8N114 240 aa14.08□□□□□ -0.15
AP4E1-202ENST00000558439 NEK7Q8TDX7 302 aa14.08□□□□□ -0.15
AP4E1-202ENST00000558439 PPP1R14AQ96A00 147 aa14.08□□□□□ -0.15
AP4E1-202ENST00000558439 OR5B2Q96R09 309 aa14.08□□□□□ -0.15
AP4E1-202ENST00000558439 OR1F2PQ96R84 312 aa14.08□□□□□ -0.15
AP4E1-202ENST00000558439 EEF1A1P5Q5VTE0 462 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 DMKNQ6E0U4 476 aaPredicted RBP14.08□□□□□ -0.16
AP4E1-202ENST00000558439 BPIFB2Q8N4F0 458 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 OR14A16Q8NHC5 309 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 SMIM4Q8WVI0 70 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 YIPF5Q969M3 257 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 SFXN2Q96NB2 322 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 ZNF587Q96SQ5 575 aaPredicted RBP14.08□□□□□ -0.16
AP4E1-202ENST00000558439 PDGFAP04085 211 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 RAP2BP61225 183 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 GUCA2AQ02747 115 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 RBMS2Q15434 407 aaKnown RBP14.08□□□□□ -0.16
AP4E1-202ENST00000558439 PNLDC1Q8NA58 520 aaKnown RBP14.08□□□□□ -0.16
AP4E1-202ENST00000558439 OR13C9Q8NGT0 318 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 ZPLD1Q8TCW7 415 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 GPR119Q8TDV5 335 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 PMM1Q92871 262 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 VOPP1Q96AW1 172 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 MRI1Q9BV20 369 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 EVA1BQ9NVM1 165 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 SLCO1C1Q9NYB5 712 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 TRAV36DV7A0A075B6V5 113 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 TLCD2A6NGC4 264 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 P2RY10O00398 339 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 ZNF208O43345 1280 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 GMDSO60547 372 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 SLC2A1P11166 492 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 FCARP24071 287 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 NKAPLQ5M9Q1 402 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 COX15Q7KZN9 410 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 OR2G2Q8NGZ5 317 aa14.08□□□□□ -0.16
AP4E1-202ENST00000558439 PRICKLE3O43900 615 aaPredicted RBP14.07□□□□□ -0.16
AP4E1-202ENST00000558439 RAF1P04049 648 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 ITGA3P26006 1051 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 MMP15P51511 669 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 LINC00303Q3SY05 128 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 C1QL3Q5VWW1 255 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 MAMSTRQ6ZN01 415 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 PDZD9Q8IXQ8 264 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 ZNF775Q96BV0 537 aaPredicted RBP14.07□□□□□ -0.16
AP4E1-202ENST00000558439 GAS2L1Q99501 681 aaPredicted RBP14.07□□□□□ -0.16
AP4E1-202ENST00000558439 LRRC61Q9BV99 259 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 KCNN3Q9UGI6 736 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 STEAP1Q9UHE8 339 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 DOCK9Q9BZ29 2069 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 TRAV1-2A0A0B4J238 106 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 HTR2CP28335 458 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 ZNF658BQ4V348 819 aaPredicted RBP14.07□□□□□ -0.16
AP4E1-202ENST00000558439 CCDC36Q8IYA8 594 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 GALNT11Q8NCW6 608 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 PTGES2Q9H7Z7 377 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 EVA1AQ9H8M9 152 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 ZNF701Q9NV72 531 aaPredicted RBP14.07□□□□□ -0.16
AP4E1-202ENST00000558439 WBP1LQ9NX94 342 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 MEGF11A6BM72 1044 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 TNFRSF10AO00220 468 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 CAMK2DQ13557 499 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 CD226Q15762 336 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 STEAP1BQ6NZ63 245 aa14.07□□□□□ -0.16
AP4E1-202ENST00000558439 C12orf45Q8N5I9 185 aaPredicted RBP14.07□□□□□ -0.16
AP4E1-202ENST00000558439 VSX1Q9NZR4 365 aaPredicted RBP14.07□□□□□ -0.16
AP4E1-202ENST00000558439 C4orf47A7E2U8 309 aa14.06□□□□□ -0.16
AP4E1-202ENST00000558439 C5orf67F2Z3F1 127 aa14.06□□□□□ -0.16
AP4E1-202ENST00000558439 ZNF749O43361 778 aa14.06□□□□□ -0.16
AP4E1-202ENST00000558439 IGKV1D-16P01601 117 aa14.06□□□□□ -0.16
AP4E1-202ENST00000558439 FZD2Q14332 565 aa14.06□□□□□ -0.16
AP4E1-202ENST00000558439 C16orf47Q6ZP98 133 aaPredicted RBP14.06□□□□□ -0.16
AP4E1-202ENST00000558439 ABHD12BQ7Z5M8 362 aaPredicted RBP14.06□□□□□ -0.16
AP4E1-202ENST00000558439 PHYHIPQ92561 330 aa14.06□□□□□ -0.16
AP4E1-202ENST00000558439 FNDC1Q4ZHG4 1894 aaPredicted RBP14.06□□□□□ -0.16
AP4E1-202ENST00000558439 IGHV5-51A0A0C4DH38 117 aa14.06□□□□□ -0.16
AP4E1-202ENST00000558439 F5H5K5 113 aa14.06□□□□□ -0.16
AP4E1-202ENST00000558439 PPICP45877 212 aa14.06□□□□□ -0.16
AP4E1-202ENST00000558439 EMP2P54851 167 aa14.06□□□□□ -0.16
AP4E1-202ENST00000558439 EXOSC2Q13868 293 aaKnown RBP14.06□□□□□ -0.16
AP4E1-202ENST00000558439 ZNF74Q16587 644 aa14.06□□□□□ -0.16
AP4E1-202ENST00000558439 WDR45BQ5MNZ6 344 aa14.06□□□□□ -0.16
AP4E1-202ENST00000558439 C1orf140Q5VVS0 124 aa14.06□□□□□ -0.16
AP4E1-202ENST00000558439 DCXRQ7Z4W1 244 aa14.06□□□□□ -0.16
AP4E1-202ENST00000558439 GABRG3Q99928 467 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms